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. 2019 Apr 15;19:140. doi: 10.1186/s12870-019-1757-3

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Length distribution and phylogenetic trees of LTRs. a Length distribution of complete LTRs (green whiskers and black boxes represent average length distribution, and white circles represent median). b Copia-like superfamily RT domain phylogenetic tree. c Gypsy-like superfamily RT domain phylogenetic tree. Citrus also keeps six Gypsy lineages (reference LTR retrotransposons are shown as italic with circles on branches, others are LTR families in Citrus)