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. 2019 Apr 15;14:7. doi: 10.1186/s13062-019-0235-z

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Potential function of lncRNA11254 associated with transcription factor responding to the pathogen. a Overview of aligned reads for lncRNA11254 using Integrative Genomics Viewer (IGV) with coverage of per base in sample 1D being shown. Other hub lncRNAs were shown in Additional file 3: Figure S2. b The structure of scaffold10290 coving lncRNA11254 and the protein coding gene on the antisense strand. c Motif detection on lncRNA11254. d FPKM values of lncRNA11254 along the infection at different stages. e The relative expression by real-time quantitative reverse transcription PCR (qRT-PCR) in non-inoculated control (CK) and infected samples (INF). Values were presented as the mean ± SE of three independent experiments and * indicated significant differences (P < 0.05)