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. 2018 Nov 28;219(9):1448–1455. doi: 10.1093/infdis/jiy680

Table 1.

Analysis of the hag/mid Gene in Persistent Strains of Moraxella catarrhalis

Strain
(Initial Isolate/ Final Isolate)
Duration of Persistence (Days) Hag/MID Expression Sequence Immediately Downstream of Start Codon
Initial
Isolate
Final
Isolate
Initial
Isolate
Final
Isolate
5P47B2/
5P54B2
260 + 6Gs in frame 7Gs out of frame
142P77B1a/
142P87B1
296 + 6Gs in frame 7Gs out of frame
173P27B1b/
173P31B1b
134 + 6Gs in frame 6Gs in frame
(downstream in-frame stop codon)
74P50B1/
74P58B1
253 1Ac+9Gs out of frame 1Ac + 9Gs out of frame
46P58B1/
46P73B1a
435 1Ac+9Gs out of frame 1Ac + 9Gs out of frame

aMultilocus sequence type and Hag/MID sequence determined by polymerase chain reaction.

bGenome sequence determined on Illumina platform. Remaining isolates determined on Pacific Biosciences (PacBio) Sequel platform.

cAn additional A was present immediately upstream of the polynucleotide G repeat.