Table 1.
Model parameters.
| Parameter | Definition | Type | Value | Parameter set 3114 |
|---|---|---|---|---|
| Vol | Cell volume | Controlled | 10–100 fl | |
| SProtU | Protein synthesis | Controlled | 0.01–1 molec·s−1·fl−1 | |
| SCln3 | Cln3 synthesis | Fitted | 4.9 × 10−2–4.8 molec·s−1·fl−1 | 0.126 molec·s−1·fl−1 |
| SYdj1 | Ydj1 synthesis | Fitted | 4.8 × 10−5–6.0 × 10−2 molec·s−1·fl−1 | 9.19 × 10−4 molec·s−1·fl−1 |
| kdProtU | ProtU degradation | Fitted | 6.4 × 10−3–31.5 s−1 | 7.26 × 10−2 s−1 |
| kdProtF | ProtF degradation | Fitted | 0.01* kdProtU·s−1 | 7.26 × 10−4 s−1 |
| kb | Binding to Ydj1 | Fitted | 1.4 × 10−2–26.7 fl·molec−1·s−1 | 0.891 fl·molec−1·s−1 |
| kr | Release from Ydj1 | Fitted | 2.8 × 10−3–7.7 s−1 | 0.388 s−1 |
| kdCln3U | Cln3U degradation | Fixed | 6.93 × 10−2 s−1 | |
| kdCln3F | Cln3F degradation | Fixed | 3.85 × 10−2 s−1 | |
| kdYdj1 | Ydj1 degradation | Fixed | 5.77 × 10−3 s−1 |