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Oligonucleotide primers and DNA probes for the specific detection of MAYV and CHIKV in mixed infections
| 5′→3′ | Nucleotide position | |
| Primers for cDNA synthesis | ||
| CHIKV | ACGAAACCACTGTATCACAGCG | 921-900 |
| MAYV | CGGTTTCATTCTCTTCTTCCTC | 781-760 |
| Primers for qPCR | ||
| CHIKV F | CGTACTGTTCTCAGTCGGGTC | 791-811 |
| CHIKV R | GATGGAACACTGAAGGTAAGTGC | 873-851 |
| MAYV F | CCTACCCAACATATGCAACCA | 648-668 |
| MAYV R | AAGGTGTCCCTCAGTCAGT | 742-724 |
| Probes | ||
| CHIKV | TACCCGGAGAGCCGTAAGCTTCTTA | 819-843 |
| MAYV | ACGAACAGGTGTTGAAAGCCAGGA | 678-701 |
