Table 1.

Summary of sequencing statistics

	Avg. seq. coverage	Avg. frag. length	Physical coverage
Pacific Biosciences	39.6 (child) 20.03 (parent)	8165 (child) 9619 (parent)	39.6
Oxford Nanopore	18.9 (HG00733)	11,993	18.9
Illumina short insert	74.5	694	171
Illumina liWGS	3	3475	159
Illumina 7 kb JMP	1.1	6973.2	39.2
10X Chromium	82.4	90,098	53.9
Bionano Genomics	N/A	2.81E + 05	116.7
Tru-Seq SLR	3.47	4900	3.47
Strand-seq	N/A	N/A	5.87
Hi-C	19.49	1.03E + 07	N/A
Total	223.56		607.08

Physical coverage is given for Illumina short insert, liWGS, 7 kb JMP. 10X Chromium physical coverage is estimated read cloud coverage

For Hi-C, fragment length is the distance between two read ends for intra-chromosome read pairs