Table 1.
HR/IR DMR |
|||
---|---|---|---|
Yes | No | ||
LR/IR DMR | |||
Yes | n11 (9) | n12 (172) | No. of both HR/LR DMRs and LR/IR DMRs |
No | n21 (122) | n22 (631) | No. of HR/LR DMRs but not LR/IR DMRs |
No. of both HR/LR DMRs and HR/IR DMRs | No. of HR/LR DMRs but not HR/IR DMRs | Total no. of of HR/LR DMRs: n (934) |
aUsing the DMRs identified in HR rat versus LR rat methylome comparisons (threshold: p < 0.05), the profile of IR rats, which are created by cross-breeding the HR/LR lines, was contrasted with HR and LR profiles (HR/IR or LR/IR comparisons). The paired outcomes are shown in a 2 × 2 contingency table. Because more LR/IR DMRs were observed than HR/IR DMRs (172 vs 122), the IR methylome profiles have a tendency to be more similar to HR (p = 0.004267; McNemar's χ2 test).