. 2019 Jan 14;5(1):7. doi: 10.3390/ncrna5010007

Table 1.

Direct interactions between viral and cellular RNA with functional impact.

Phenotype	Virus	Family	Cellular RNA	Ref
Repression of replication	EV71	Picornaviridae	miR-296-5p	[41]
	PFV-1	Retroviridae	miR-32	[42]
	HIV-1	Retroviridae	miR-29a	[43]
	VSV	Rhabdoviridae	miR-24; miR-93	[44]
Tissue specific repression of replication leading to decreased IFN response	EEEV	Togaviridae	miR-142-3p	[45]
Increased RNA replication, translation and stability	HCV, other hepaciviruses	Flaviviridae	miR-122	[46,47,48,49,50,51,52,53,54,55,56]
Increased RNA replication, translation and stability	BVDV, other pestiviruses	Flaviviridae	miR-17/20/93/106 family (let-7 family)	[57]
Reverse transcriptase priming	HIV, SIV, FIV, MMTV, others	Retroviridae	tRNA^Lys₃	[58,59,60]
	HTLV, MuLV, BLV, others	Retroviridae	tRNA^Pro	[61]
	Avian retroviruses	Retroviridae	tRNA^Trp	[61]