Table 4.
Selection of transcripts differentially expressed in roots between 1103P and SO4 at 4 and 14 days of growth under Mg deficiency
| V1 Genome ID | Functional annotation | Log2(ratio) |
|---|---|---|
| 1103P vs SO4 at 4 days | ||
| Cell wall organization and biogenesis | ||
| VIT_00s0414g00010 | cellulose synthase CSLE1 | 1.19 |
| VIT_00s0469g00040 | cellulose synthase CSLE1 | 1.30 |
| VIT_00s0531g00060 | cellulose synthase CSLE1 | 1.01 |
| VIT_00s1213g00010 | cellulose synthase CSLE1 | 1.23 |
| VIT_00s1213g00020 | cellulose synthase CSLE1 | 1.19 |
| VIT_01s0127g00850 | polygalacturonase BURP | 1.02 |
| VIT_04s0044g01010 | pectinesterase family | 1.03 |
| VIT_05s0020g02540 | endo-1,3;1,4-beta-D-glucanase precursor | 1.11 |
| VIT_10s0116g00590 | pectinesterase family | 1.04 |
| VIT_12s0059g00960 | cellulose synthase CSLB04 | 1.71 |
| VIT_12s0059g00990 | cellulose synthase CSLB04 | 1.06 |
| VIT_12s0059g00990 | cellulose synthase CSLB04 | 1.09 |
| Cellular process | ||
| VIT_09s0002g06470 | CYP81B2v1 | −1.16 |
| VIT_09s0002g06480 | CYP81B2v1 | −1.00 |
| Establishment of localization | ||
| VIT_08s0007g00030 | cation/hydrogen exchanger 20 (CHX20) | −1.27 |
| VIT_11s0103g00010 | potassium-sodium symporter HKT2 | 1.23 |
| Homostatic process | ||
| VIT_06s0004g07040 | glutaredoxin | −1.08 |
| Regulation of biological process | ||
| VIT_00s0684g00020 | calmodulin binding IQD20 (IQ-domain 20) | −1.03 |
| Regulation of molecular function | ||
| VIT_01s0010g03930 | WRKY transcription Factor (VvWRKY03) | −1.39 |
| VIT_10s0003g00870 | TCP family transcription factor 4 | 1.38 |
| VIT_19s0014g03300 | NAC domain-containing protein (VvNAC18) | −1.27 |
| VIT_19s0027g00870 | NAC domain-containing protein (VvNAC30) | −1.57 |
| VIT_19s0090g00590 | MYB domain protein 101 | −1.07 |
| Response to stress | ||
| VIT_00s0370g00070 | epoxide hydrolase | 1.27 |
| VIT_01s0150g00450 | respiratory burst oxidase protein D (RBOHD) | −1.45 |
| VIT_05s0077g02020 | epoxide hydrolase | −1.26 |
| Secondary metabolic process | ||
| VIT_00s0724g00010 | pinene synthase | −1.01 |
| VIT_06s0004g05670 | glutathione S-transferase 25 | −1.01 |
| VIT_15s0046g03580 | (+)-neomenthol dehydrogenase | 1.06 |
| VIT_16s0100g01190 | stilbene synthase (VvSTS47) | −1.39 |
| VIT_18s0001g04110 | (−)-germacrene D synthase (VvTPS05) | 1.10 |
| VIT_18s0001g11430 | flavonoid 3-monooxygenase | −1.96 |
| VIT_19s0093g00320 | glutathione S-transferase (VvGST1) | −1.65 |
| VIT_19s0135g00180 | CYP72A59 | −1.10 |
| 1103P vs SO4 at 14 days | ||
| Cell wall organization and biogenesis | ||
| VIT_04s0044g01010 | pectinesterase family | 1.15 |
| VIT_05s0020g02540 | endo-1,3;1,4-beta-D-glucanase precursor | 1.06 |
| VIT_09s0002g06380 | polygalacturonase GH28 | 1.12 |
| Cellular process | ||
| VIT_15s0048g01680 | CYP704G7 | −1.35 |
| VIT_15s0048g01690 | CYP86A1 | −1.28 |
| VIT_18s0001g11490 | CYP82C1p | −1.51 |
| VIT_18s0001g11560 | CYP82A3 | −1.20 |
| Establishment of localization | ||
| VIT_01s0011g03020 | HAK5 (High affinity K+ transporter 5) | −1.08 |
| VIT_04s0008g04830 | ABC Transporter (VvPDR31 - VvABCG61) | −1.49 |
| VIT_04s0023g02530 | non-intrinsic ABC protein 12 | −1.03 |
| VIT_08s0007g03710 | ABC Transporter (VvPDR23 - VvABCG53) | 1.10 |
| VIT_09s0002g03550 | ABC Transporter (VvPDR3 - VvABCG33) | −1.92 |
| VIT_09s0002g05380 | ABC transporter g family pleiotropic drug resistance 12 PDR12 | −1.43 |
| VIT_09s0002g05470 | ABC transporter g family pleiotropic drug resistance 12 PDR12 | −1.57 |
| VIT_09s0018g00900 | ABC transporter g family pleiotropic drug resistance 12 PDR12 | −1.54 |
| VIT_13s0106g00580 | potassium channel AKT1 | −1.54 |
| VIT_14s0068g00210 | ABC Transporter (VvMDR16 - VvABCB16) | −1.18 |
| VIT_18s0001g10650 | ABC transporter g family pleiotropic drug resistance 12 PDR12 | −1.22 |
| Homostatic process | ||
| VIT_04s0023g02800 | glutaredoxin | 1.03 |
| Lipid metabolic process | ||
| VIT_13s0064g01480 | lipoxygenase LOX1 | −1.59 |
| VIT_13s0064g01490 | lipoxygenase | −1.30 |
| Regulation of molecular function | ||
| VIT_01s0127g00640 | bHLH | −1.15 |
| VIT_03s0167g00070 | putative MADS-box Short Vegetal Phase 5 | 1.18 |
| Response to endogenous stimulus | ||
| VIT_04s0008g06000 | VvERF045 | 1.04 |
| VIT_04s0079g00160 | auxin response factor 8 | −1.06 |
| Response to stress | ||
| VIT_00s0120g00010 | peroxisomal biogenesis factor 11 (PEX11C) | −1.09 |
| VIT_00s0370g00060 | epoxide hydrolase 2 | 1.19 |
| VIT_12s0059g02410 | peroxidase | 1.43 |
| VIT_13s0067g02360 | peroxidase, class III | −1.35 |
| Secondary metabolic process | ||
| VIT_00s0444g00010 | laccase | −1.17 |
| VIT_00s0704g00020 | 5-alpha-taxadienol-10-beta-hydroxylase | 1.04 |
| VIT_00s0731g00010 | laccase | −1.18 |
| VIT_00s1212g00020 | laccase | −1.33 |
| VIT_03s0063g01590 | CYP82C4 | 1.33 |
| VIT_06s0004g07650 | taxadien-5-alpha-ol-O-acetyltransferase | −1.26 |
| VIT_06s0009g03050 | flavonoid 3′,5′-hydroxylase | −1.21 |
| VIT_07s0031g01380 | ferulate 5-hydroxylase | −1.43 |
| VIT_12s0028g02700 | isoflavone methyltransferase | −1.69 |
| VIT_13s0067g00380 | pinene synthase | −1.14 |
| VIT_17s0000g05610 | isopiperitenol dehydrogenase | 1.08 |
| VIT_18s0001g01010 | laccase | −1.32 |
| VIT_19s0093g00350 | glutathione S-transferase 25 | 1.09 |