Table 3. Characteristics of the A. rhodensis genetic map.
Linkage group | Number of RAD- seq markers | Homozygous APS4/APS4 frequency | Heterozygous APS4/APS6 frequency | Homozygous APS6/APS6 frequency | Assembly length (bp)* | Number of protein-coding genes |
---|---|---|---|---|---|---|
LG1 | 109 | 0.30 | 0.35 | 0.35 | 8,489,927 | 1,538 |
LG2 | 149 | 0.29 | 0.37 | 0.34 | 9,627,060 | 1,760 |
LG3 | 184 | 0.21 | 0.38 | 0.51 | 8,741,542 | 1,748 |
LG4 | 143 | 0.35 | 0.39 | 0.36 | 8,804,062 | 1,586 |
LG5X | 92 | 0.04 | 0.88 | 0.08 | 3,488,253 | 604 |
LG6 | 185 | 0.35 | 0.39 | 0.26 | 9,421,540 | 1,871 |
LG7 | 190 | 0.23 | 0.42 | 0.35 | 9,306,279 | 1,754 |
Overall | 1052 | 0.26 | 0.42 | 0.32 | 57,878,663 | 10,861** |
Length in chromosomal assembly after anchoring the scaffolds onto the genetic map.
93% of total number of protein coding genes.