Table 1. Summary of RNA-Seq data and mapping.

Breeds	Raw reads	Trimmed reads	Concordantly mapped reads	Discordantly mapped reads	Uniquely mapped reads (%)	Total mapping
Lori-Bakhtiari_1	26,282,890	26,282,599	22,134,586	1,938,138	22,408,851 (0.85)	24,072,724 (0.92)
Lori-Bakhtiari_2	20,075,866	20,075,798	13,620,516	3,029,187	15,633,869 (0.78)	16,649,703 (0.83)
Lori-Bakhtiari_3	20,428,424	20,428,247	13,552,931	3,326,710	15,676,435 (0.77)	16,879,641 (0.83)
Zel_1	22,292,871	22,292,640	17,922,852	1,758,155	17,456,499 (0.78)	19,681,007 (0.83)
Zel_2	20,164,542	20,164,351	13,501,701	3,320,607	15,650,133 (0.78)	16,822,308 (0.83)
Zel_3	20,532,170	20,532,024	14,677,141	3,166,595	16,127,823 (0.79)	17,843,736 (0.87)