Table 2. Differentially expressed lncRNAs and their cis target genes.
| lncRNA | Closest left mRNA | Closest right mRNA | Expression* in Lori-Bakhtiari | Expression* in Zel | FDR |
|---|---|---|---|---|---|
| lincRNA.27817 | SLC25A53 | FAM199X | 0 | 5.13 | 0.008 |
| lincRNA.26835 | SHROOM2 | CLCN4 | 12.82 | 0 | 0.008 |
| lincRNA.25403 | SMYD2 | COL12A1 | 14.92 | 2.02 | 0.014 |
| lincRNA.12819 | ENSOARG00000015627 | LGSN | 47.27 | 0.47 | 0.035 |
| lincRNA.16164 | ENSOARG00000004542 | TSHZ1 | 3.14 | 0 | 0.059 |
| lincRNA.21492 | CCM2 | MYO1G | 64.52 | 19.27 | 0.059 |
| lincRNA.3473 | ACACA | C17orf78 | 80.07 | 303.52 | 0.066 |
| ilncRNA.20260 | PRDM4 | PRDM4 | 277.18 | 26.50 | 0.082 |
*
Expression of genes are represented as FPKM.