Table 2. Assembly summary statistics.
Metric | G. legneri | A. bilineata | P. maculata |
---|---|---|---|
GC (%) | 40.6 | 39.9 | 28.4 |
Scaffold count | 7,863 | 33,003 | 147,656 |
Contig count | 13,705 | 40,228 | 169,825 |
Total length (Mb) | 140.1 | 85.9 | 422.4 |
Predicted length KmerGenie (Mb) | 142 | 112 | 536 |
Predicted length GenomeScope (Mb) | 167 | 123 | 429 |
Gap (%) | 0.18 | 1.1 | 0.29 |
Scaffold N50 (kb) | 167.3 | 54.1 | 7.7 |
Contig N50 (kb) | 37.8 | 12.1 | 5.9 |
Max. scaffold length (Mb) | 1.5 | 0,876 | 0.17 |
Max. contig length (kb) | 371.7 | 316.8 | 86.6 |
Number of scaffolds > 50 kb | 684 | 445 | 108 |
% of genome in scaffolds > 50 kb | 82.4 | 52.1 | 1.8 |