Table 2.
Gene Symbol | Primers Sequences | Reaction Conditions | Primer (nM) | Target Sequence Accession Number | References | |
---|---|---|---|---|---|---|
CGA | F: 5′-CTCCAGAGCGTACCCAACTC-3′ R: 5′-ACTGTGGCCTTGGTAAATGC-3′ |
Activation: 50 °C, 30 min; | 40 cycles | 500 nM | XM_005659277.1 | [60] |
95 °C 15 min, | ||||||
1. Denaturation: 94 °C, 15 s | ||||||
2. Annealing: 55 °C, 30 s | ||||||
3. Extension: 72 °C, 30 s | ||||||
77 °C, 15 s | ||||||
CXCL8 | F: 5′-GGCAGTTTTCCTGCTTTCT-3′ R: 5′-CAGTGGGGTCCACTCTCAAT-3′ |
Activation: 95 °C, 15 min | 40 cycles | 400 nM | X61151.1 | [61] |
1. Denaturation: 94 °C, 15 s | ||||||
2. Annealing: 58 °C, 30 s | ||||||
3. Extension: 72 °C, 30 s | ||||||
FGF7/KGF | F: 5′-GCTTCCACATTATCTGTCTGGTG-3′ R: 5′-GTCCCTTTGACTTTGCCTCG-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | AF217463.1 | This study |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
HSD3B1 | F: 5′-AGGTTCGCCCGCTCATC-3′ R: 5′-CTGGGCACCGAGAAATACTTG-3′ |
Activation: 95 °C, 10 min | 40 cycles | 300 nM | NM_001004049.1 | [62] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 61 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
HSD17B8 | F: 5′-TTCTGCTCCGCATGTCTGAAG-3′ R: 5′-CCATGTTTCCCACCTTCCCTA-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | NM_001130730.1 | This study |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
IL1B | F: 5′-TGCCAACGTGCAGTCTATGG-3′ R: 5′-TGGGCCAGCCAGCACTAG-3′ |
Activation: 95 °C, 10 min | 40 cycles | 100 nM | NM_214055 | [29] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
INSR | F: 5′-AAACGCCAGGGACATCGTCAAGG-3′ R: 5′-CCGCAGGGAACGCAGGTAACTCT-3′ |
Activation: 95 °C-10 min | 40 cycles | 200 nM | XM_005654749.1 | [63] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
ITGAL | F: 5′-CTTGTCGAGCTGAAGGCTGA-3′ R: 5′-TTCCTGGTCCTTGGTGAGGA-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | NM_001044608.1 | This study |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
LHB | F: 5′-TTCACCACCAGCATCTGTGC-3′ R: 5′-AAGAGGAGGCCTGGGAGTAG-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | XM_005664700.1 | This study |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
MUC4 | F: 5′-GATGCCCTGGCCACAGAA-3′ R: 5′-TGATTCAAGGTAGCATTCATTTGC-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | NM_001206344.2 | [64] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
PRLR | F: 5′-CCAGATACCTAATGACTTCTCAATG-3′ R: 5′-TCCAACAGATGGGTGTCAAA-3′ |
Activation: 50 °C, 30 min; | 40 cycles | 500 nM | NM_214084 | [63] |
95 °C, 15 min | ||||||
1. Denaturation: 94 °C, 15 s | ||||||
2. Annealing: 55 °C, 30 s | ||||||
3. Extension: 72 °C, 30 s | ||||||
77 °C, 15 s | ||||||
PTGS1 | F: 5′-CAACACTTCACCCACCAGTTCTTC-3′ R: 5′-TCCATAAATGTGGCCGAGGTCTAC-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | AF207823.1 | [65] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 60 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
TGFA | F: 5′-CGCGCTGGGTATCTTGTTG-3′ R: 5′-GTGGGAATCTGGGCAGTCAT-3′ |
Activation: 50 °C, 2 min; | 40 cycles | 200 nM | NM_214251.1 | [66] |
95 °C, 10 min | ||||||
1. Denaturation: 95 °C, 3 s | ||||||
2. Annealing: 60 °C, 30 s | ||||||
3. Extension: 72 °C, 1 min | ||||||
ACTB | F: 5′-ACATCAAGGAGAAGCTCTGCTACG-3′ R: 5′-GAGGGGCGATGATCTTGATCTTCA-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | U07786 | [67] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 61 °C, 1 min | ||||||
3. Extension: 72 °C, 1 min | ||||||
GAPDH | F: 5′-CCTTCATTGACCTCCACTACATGG-3′ R: 5′-CCACAACATACGTAGCACCAGCATC-3′ |
Activation: 95 °C, 10 min | 40 cycles | 500 nM | U48832 | [68] |
1. Denaturation: 95 °C, 15 s | ||||||
2. Annealing: 59 °C, 1 min |