Skip to main content
. 2019 Mar 16;20(6):1335. doi: 10.3390/ijms20061335

Table 2.

Primers used for the validation of microarray results.

Gene Symbol Primers Sequences Reaction Conditions Primer (nM) Target Sequence Accession Number References
CGA F: 5′-CTCCAGAGCGTACCCAACTC-3′
R: 5′-ACTGTGGCCTTGGTAAATGC-3′
Activation: 50 °C, 30 min; 40 cycles 500 nM XM_005659277.1 [60]
       95 °C 15 min,
1. Denaturation: 94 °C, 15 s
2. Annealing: 55 °C, 30 s
3. Extension: 72 °C, 30 s
         77 °C, 15 s
CXCL8 F: 5′-GGCAGTTTTCCTGCTTTCT-3′
R: 5′-CAGTGGGGTCCACTCTCAAT-3′
Activation: 95 °C, 15 min 40 cycles 400 nM X61151.1 [61]
1. Denaturation: 94 °C, 15 s
2. Annealing: 58 °C, 30 s
3. Extension: 72 °C, 30 s
FGF7/KGF F: 5′-GCTTCCACATTATCTGTCTGGTG-3′
R: 5′-GTCCCTTTGACTTTGCCTCG-3′
Activation: 95 °C, 10 min 40 cycles 500 nM AF217463.1 This study
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
HSD3B1 F: 5′-AGGTTCGCCCGCTCATC-3′
R: 5′-CTGGGCACCGAGAAATACTTG-3′
Activation: 95 °C, 10 min 40 cycles 300 nM NM_001004049.1 [62]
1. Denaturation: 95 °C, 15 s
2. Annealing: 61 °C, 1 min
3. Extension: 72 °C, 1 min
HSD17B8 F: 5′-TTCTGCTCCGCATGTCTGAAG-3′
R: 5′-CCATGTTTCCCACCTTCCCTA-3′
Activation: 95 °C, 10 min 40 cycles 500 nM NM_001130730.1 This study
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
IL1B F: 5′-TGCCAACGTGCAGTCTATGG-3′
R: 5′-TGGGCCAGCCAGCACTAG-3′
Activation: 95 °C, 10 min 40 cycles 100 nM NM_214055 [29]
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
INSR F: 5′-AAACGCCAGGGACATCGTCAAGG-3′
R: 5′-CCGCAGGGAACGCAGGTAACTCT-3′
Activation: 95 °C-10 min 40 cycles 200 nM XM_005654749.1 [63]
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
ITGAL F: 5′-CTTGTCGAGCTGAAGGCTGA-3′
R: 5′-TTCCTGGTCCTTGGTGAGGA-3′
Activation: 95 °C, 10 min 40 cycles 500 nM NM_001044608.1 This study
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
LHB F: 5′-TTCACCACCAGCATCTGTGC-3′
R: 5′-AAGAGGAGGCCTGGGAGTAG-3′
Activation: 95 °C, 10 min 40 cycles 500 nM XM_005664700.1 This study
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
MUC4 F: 5′-GATGCCCTGGCCACAGAA-3′
R: 5′-TGATTCAAGGTAGCATTCATTTGC-3′
Activation: 95 °C, 10 min 40 cycles 500 nM NM_001206344.2 [64]
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
PRLR F: 5′-CCAGATACCTAATGACTTCTCAATG-3′
R: 5′-TCCAACAGATGGGTGTCAAA-3′
Activation: 50 °C, 30 min; 40 cycles 500 nM NM_214084 [63]
      95 °C, 15 min
1. Denaturation: 94 °C, 15 s
2. Annealing: 55 °C, 30 s
3. Extension: 72 °C, 30 s
         77 °C, 15 s
PTGS1 F: 5′-CAACACTTCACCCACCAGTTCTTC-3′
R: 5′-TCCATAAATGTGGCCGAGGTCTAC-3′
Activation: 95 °C, 10 min 40 cycles 500 nM AF207823.1 [65]
1. Denaturation: 95 °C, 15 s
2. Annealing: 60 °C, 1 min
3. Extension: 72 °C, 1 min
TGFA F: 5′-CGCGCTGGGTATCTTGTTG-3′
R: 5′-GTGGGAATCTGGGCAGTCAT-3′
Activation: 50 °C, 2 min; 40 cycles 200 nM NM_214251.1 [66]
     95 °C, 10 min
1. Denaturation: 95 °C, 3 s
2. Annealing: 60 °C, 30 s
3. Extension: 72 °C, 1 min
ACTB F: 5′-ACATCAAGGAGAAGCTCTGCTACG-3′
R: 5′-GAGGGGCGATGATCTTGATCTTCA-3′
Activation: 95 °C, 10 min 40 cycles 500 nM U07786 [67]
1. Denaturation: 95 °C, 15 s
2. Annealing: 61 °C, 1 min
3. Extension: 72 °C, 1 min
GAPDH F: 5′-CCTTCATTGACCTCCACTACATGG-3′
R: 5′-CCACAACATACGTAGCACCAGCATC-3′
Activation: 95 °C, 10 min 40 cycles 500 nM U48832 [68]
1. Denaturation: 95 °C, 15 s
2. Annealing: 59 °C, 1 min