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. 2019 Apr 18;20(Suppl 4):138. doi: 10.1186/s12859-019-2694-8

Table 3.

Running time breakdown, in seconds, of the two FastKmer stages on the 32GB dataset with k fixed to 28 and a decreasing number of executors

64 Workers 32 Workers 16 Workers 8 Workers
Stage 1
Scheduler Delay time 0.07 0.08 0.1 0.26
Executor Deserialization time 0.93 1.01 2.15 3.98
Executor Compute time 351.4 580.9 1112.51 2655.48
Shuffle Read time 0 0 0 0
Shuffle Write time 1.22 2.33 4.59 10.42
Shuffle Read local (MB) 0 0 0 0
Shuffle Read remote (MB) 0 0 0 0
Shuffle Write (MB) 504.7 1009.5 2018.7 4542
Stage 2
Scheduler Delay time 0.08 0.14 0.07 0.11
Executor Deserialization time 0.19 0.44 1.05 1.82
Executor Compute time 773.52 868.59 1648.76 3859.24
Shuffle Read time 0.06 0 0 0.01
Shuffle Write time 0 0 0 0
Shuffle Read local (MB) 15.6 62.5 250.6 1125.9
Shuffle Read remote (MB) 484.4 937.9 1749.9 3375.3
Shuffle Write (MB) 0 0 0 0

The table reports also the size, in megabytes, of the corresponding read and write shuffles