Skip to main content
. 2019 Mar 18;20(6):1359. doi: 10.3390/ijms20061359

Table 4.

Differentially abundant transcripts both at proteomic and transcriptomic levels in M12 under waterlogging.

Protein Accession Protein Description MW (kDa) M12W/M12CK Ratio M12W/M12CK p-Value Protein LOG2 M12W/M12CK Regulation Transcription Log2 M12_W/M12_CK p adj Regulation Type
Cluster-1252.18690_orf1 Unknown 42.266 1.816 5.1953 × 10−3 0.860764203 Up 1.7749 9.0263 × 10−7 Up Up-Up
Cluster-1252.20320_orf1 Probable mannitol dehydrogenase OS = Medicago sativa GN=CAD1 PE=1 SV=1 39.526 1.414 2.8745 × 10−2 0.49978212 Up 1.664 2.132 × 10−4 Up Up-Up
Cluster-1252.24948_orf1 Acidic endochitinase OS=Cicer arietinum PE=2 SV=1 33.034 2.91 5.1816 × 10−3 1.541019153 Up 3.0386 4.4982 × 10−18 Up Up-Up
Cluster-1252.25469_orf1 Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1 26.335 2.141 1.02394 × 10−3 1.098284796 Up 2.0505 8.3503 × 10−25 Up Up-Up
Cluster-1252.29574_orf1 Unknown 56.855 1.302 1.41228 × 10−2 0.380729449 Up 1.0417 3.2239 × 10−4 Up Up-Up
Cluster-1252.33343_orf1 “Ornithine aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=DELTA-OAT PE=1 SV=1” 51.439 1.503 4.2365 × 10−8 0.587845009 Up 1.4006 2.5266 × 10−19 Up Up-Up
Cluster-1252.35376_orf1 Unknown 22.309 3.216 3.69926 × 10−13 1.685267407 Up 2.8743 1.7054 × 10−62 Up Up-Up
Cluster-1252.36163_orf1 Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2 30.779 2.387 1.83814 × 10−2 1.255198566 Up 1.3227 1.0834 × 10−4 Up Up-Up
Cluster-1252.38004_orf2 Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana GN=CAR9 PE=2 SV=1 21.642 1.534 7.6395 × 10−5 0.617298483 Up 1.4498 1.0054 × 10−10 Up Up-Up
Cluster-1252.39652_orf1 18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1 12.611 1.805 1.62154 × 10−3 0.851998837 Up 2.2232 4.4188 × 10−12 Up Up-Up
Cluster-1252.41663_orf1 Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1 146.66 1.7 3.5979 × 10−5 0.765534746 Up 1.1772 1.5419 × 10−12 Up Up-Up
Cluster-1252.41945_orf1 Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1 59.046 2.277 4.6658 × 10−2 1.187134291 Up 2.2953 1.4116 × 10−4 Up Up-Up
Cluster-1252.42642_orf1 Unknown 16.163 3.21 9.99201 × 10−16 1.682573297 Up 1.6109 5.0453 × 10−27 Up Up-Up
Cluster-1252.42960_orf1 Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1 103.53 1.698 1.90671 × 10−5 0.763836459 Up 1.0147 2.9677 × 10−13 Up Up-Up
Cluster-1252.42962_orf1 Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1 36.025 1.447 5.56521 × 10−12 0.533064922 Up 1.5685 3.609 × 10−25 Up Up-Up
Cluster-1252.43381_orf1 Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1 20.658 4.005 2.2805 × 10−3 2.001802243 Up 1.923 5.4445 × 10−14 Up Up-Up
Cluster-1252.43664_orf1 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 34.902 2.775 1.0 × 10−32 1.472487771 Up 1.4878 7.6623 × 10−82 Up Up-Up
Cluster-1252.43700_orf1 Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1 148.25 1.998 2.2366 × 10−3 0.998556583 Up 1.237 4.6915 × 10−108 Up Up-Up
Cluster-1252.44442_orf1 “Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana GN=FSD2 PE=1 SV=1” 36.823 1.725 3.0282 × 10−10 0.786596362 Up 1.0925 1.076 × 10−3 Up Up-Up
Cluster-1252.45489_orf1 Unknown 87.568 1.436 2.8214 × 10−4 0.522055749 Up 1.1902 4.0089 × 10−11 Up Up-Up
Cluster-1252.45907_orf1 Methylecgonone reductase OS=Erythroxylum coca PE=1 SV=1 35.219 1.928 1.2051 × 10−7 0.947105052 Up 1.071 1.6158 × 10−5 Up Up-Up
Cluster-1252.48706_orf1 Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2 82.353 2.766 4.1957 × 10−8 1.467801156 Up 4.8411 2.0236 × 10−298 Up Up-Up
Cluster-1252.50314_orf1 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 47.587 2.108 7.0431 × 10−11 1.075874867 Up 2.6988 1.3474 × 10−28 Up Up-Up
Cluster-1252.53143_orf1 “1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic (Fragment) OS=Pisum sativum GN=SBEII PE=1 SV=1” 98.938 2.033 2.9402 × 10−7 1.023610215 Up 1.8785 8.7896 × 10−8 Up Up-Up
Cluster-1252.59078_orf1 Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1 19.406 2.258 3.0823 × 10−2 1.175045486 Up 2.4968 4.4984 × 10−5 Up Up-Up
Cluster-1252.62468_orf1 Unknown 107.76 8.756 6.3273 × 10−5 3.130271955 Up 3.225 2.9758 × 10−39 Up Up-Up
Cluster-1252.65950_orf1 Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1 90.573 1.834 6.6447 × 10−10 0.874993639 Up 2.8804 2.2919 × 10−15 Up Up-Up
Cluster-1252.35865_orf1 Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1 54.36 0.648 2.3014 × 10−3 −0.625934282 Down −1.5125 1.0164 × 10−18 Down Down-Down
Cluster-1252.40636_orf1 1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1 39.544 0.435 4.7576 × 10−6 −1.200912694 Down −1.535 1.4095 × 10−47 Down Down-Down
Cluster-1252.43303_orf1 “Ferredoxin--nitrite reductase, chloroplastic OS=Betula pendula GN=NIR1 PE=2 SV=1” 69.24 0.423 1.0 × 10−32 −1.241270432 Down −2.8277 4.993 × 10−52 Down Down-Down
Cluster-1252.43480_orf1 “Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1” 43.178 0.645 1.4187 × 10−11 −0.632628934 Down −1.0364 1.1526 × 10−50 Down Down-Down
Cluster-1252.43550_orf1 β-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=2 SV=1 93.798 0.506 2.2202 × 10−5 −0.98279071 Down −1.5947 5.4211 × 10−54 Down Down-Down
Cluster-1252.44318_orf1 Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1 102.62 0.623 1.33524 × 10−3 −0.682695932 Down −2.0582 3.1915 × 10−25 Down Down-Down
Cluster-1252.45309_orf1 Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2 18.198 0.552 2.9101 × 10−2 −0.857259828 Down −1.2288 1.3773 × 10−29 Down Down-Down
Cluster-1252.48945_orf1 Unknown 40.668 0.512 2.36871 × 10−11 −0.965784285 Down −2.4873 1.4274 × 10−10 Down Down-Down