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. Author manuscript; available in PMC: 2019 Apr 18.
Published in final edited form as: Methods Mol Biol. 2018;1741:135–149. doi: 10.1007/978-1-4939-7659-1_11

Table 2.

Medians of TMT ratios for mixing equal amounts of TMT labeled peptides

Median ratios for each label Channel IDs
1.0 Reporter intensity 126
1.0 Reporter intensity 127N
1.1 Reporter intensity 127C
1.0 Reporter intensity 128N
1.0 Reporter intensity 128C
0.9 Reporter intensity 129N
1.0 Reporter intensity 129C
1.0 Reporter intensity 130N
0.9 Reporter intensity 130C
0.9 Reporter intensity 131

The mixing is optimized until the medians for each TMT channel are close to 1:1:1 etc.