Table 4.
Performance of submissions using several commonly used docking programs, analyzed by their locations in the four quartiles of median pose 1 RMSD across all ligand, where Q1 is the lowest median RMSD and Q4 is the highest, for Stages 1a and 1b. Glide is not listed in Stage 1b because only one Stage 1b submission mentioned it. The bottom row of each table lists the total number of predictions in each quartile, across all methods and software packages.
| Stage 1a | ||||
| Software | Q1 | Q2 | Q3 | Q4 |
| Glide | 2 | 2 | 0 | 1 |
| Vina | 0 | 1 | 9 | 2 |
| Smina | 3 | 0 | 1 | 2 |
| All submissions | 14 | 13 | 13 | 13 |
| Stage 1b | ||||
| Software | Ql | Q2 | Q3 | Q4 |
| Vina | 2 | 6 | 6 | 5 |
| Smina | 1 | 3 | 1 | 4 |
| All submissions | 12 | 12 | 12 | 12 |