Table 5. K8 enriched regions on KSHV genome.
Region | Length | Reads | 5’downstream gene | 3’ downstream gene |
---|---|---|---|---|
+(1100..1151) | 51 | 7039 | ORF4 | |
+(2857..2915) | 58 | 1574 | ORF6 | |
+(5127..5193) | 66 | 1208 | ORF7 | |
+(8449..8489) | 40 | 1598 | ORF8 | |
+(14362..14405) | 43 | 1262 | ORF10 | |
+(19441..19481) | 40 | 249 | ORF2 | |
+(21206..21243) | 37 | 375 | ORF70 | |
+(28019..28056) | 37 | 350 | K6 | K7, PAN RNA |
+(28529..28574) | 45 | 307 | K7, PAN RNA | |
+(29323..29425) | 102 | 3709 | ORF16 | |
+(30356..30393) | 37 | 483 | ||
+(32626..32669) | 43 | 170 | ORF17 | |
+(41405..41444) | 39 | 585 | ORF23 | ORF25 |
+(51730..51781) | 51 | 873 | ORF28 | ORF33 |
+(54192..54235) | 43 | 691 | ORF28 | ORF34 |
+(62042..62107) | 65 | 1715 | ORF39 | ORF44 |
+(69554..69608) | 54 | 592 | ORF46 | |
+(74785..74873) | 88 | 2693 | ORF49 | K8 |
+(75647..75705) | 58 | 911 | ORF49 | K8.1 |
+(77585..77650) | 65 | 1268 | ORF52 | ORF54 |
+(81994..82057) | 63 | 1037 | ORF55 | ORF57 |
+(85984..86051) | 67 | 985 | vIRF-1 | |
+(89472..89517) | 45 | 1193 | vIRF-4 | |
+(91954..91998) | 44 | 426 | vIRF-3 | |
+(96966..97003) | 37 | 705 | ORF59 | |
+(103616..103642) | 26 | 236 | ORF62 | ORF64 |
+(119212..119250) | 38 | 75 | K12 | |
+(120327..120401) | 74 | 1586 | K12 | |
+(127817..127840) | 23 | 615 | ORF73 | K14 |
+(134856..134914) | 58 | 1727 | ORF75 | |
+(136344..136477) | 133 | 7040 | ORF75 | |
+(137663..137680) | 17 | 150 | K15 |