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. 2019 Jan 15;13(5):1226–1238. doi: 10.1038/s41396-018-0342-3

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 1 — Transcription levels of orthologous genes in inoculated and mock-inoculated cassava that were previously shown to be involved in the establishment of the arbuscular mycorrhizal symbiosis. Genes were chosen from [61] (Supplementary table 4). We clustered the samples by their similarity in normalized log2-counts per million of each gene and by their similarity in transcription across samples