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. Author manuscript; available in PMC: 2019 Apr 19.
Published in final edited form as: Metab Eng. 2011 Dec 22;14(2):150–161. doi: 10.1016/j.ymben.2011.12.005

Table 3:

Stoichiometry and atom transitions for the reactions in the TCA cycle model.

Reaction number Reaction stoichiometry Carbon atom transitions
1 OAC + AcCoA → Cit abcd + ef → dcbfea
2 Cit → AKG + CO2 abcdef → abcde + f
3 AKG → Glu abcde → abcde
4 AKG → Suc + CO2 abcde → ½ bcde + ½ edcb + a
5 Suc → Fum ½ abcd + ½ dcba → ½ abcd + ½ dcba
6 Fum → OAC ½ abcd + ½ dcba → abcd
7 OAC → Fum abcd → ½ abcd + ½ dcba
8 Asp → OAC abcd → abcd