Table 3.
Genome-wide details of 55,954 markers along with polymorphism information contents and marker diversity
Chromosome | Markers | Diversity | PIC | |
---|---|---|---|---|
Genome A | 1 | 2388 | 0.34 | 0.29 |
2 | 3185 | 0.34 | 0.29 | |
3 | 2714 | 0.32 | 0.28 | |
4 | 2684 | 0.33 | 0.28 | |
5 | 2473 | 0.32 | 0.28 | |
6 | 2352 | 0.32 | 0.27 | |
7 | 3728 | 0.32 | 0.27 | |
19,524a | 0.33b | 0.28b | ||
Genome B | 1 | 2908 | 0.32 | 0.27 |
2 | 4248 | 0.33 | 0.28 | |
3 | 3728 | 0.32 | 0.27 | |
4 | 1906 | 0.32 | 0.28 | |
5 | 3504 | 0.32 | 0.28 | |
6 | 3354 | 0.32 | 0.27 | |
7 | 3511 | 0.31 | 0.26 | |
23,159 | 0.32 | 0.27 | ||
Genome D | 1 | 1686 | 0.33 | 0.29 |
2 | 2353 | 0.32 | 0.28 | |
3 | 1992 | 0.31 | 0.27 | |
4 | 1180 | 0.33 | 0.29 | |
5 | 1811 | 0.33 | 0.29 | |
6 | 1777 | 0.32 | 0.28 | |
7 | 2472 | 0.32 | 0.28 | |
13,271 | 0.32 | 0.28 | ||
Total | 55,954 | 0.32§ | 0.28c |
PIC 0.6 ≥ 0.5 = 1561 markers; 0.7 ≥ 0.6 PIC = 1260 markers and ≥ 0.7 PIC = 213 markers
aTotal Value; bMean value of sub-genome; cMean value across the whole genome A, B and D