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. Author manuscript; available in PMC: 2019 Apr 21.
Published in final edited form as: Ann Intern Med. 2018 Jun 26;169(3):146–155. doi: 10.7326/M17-2252

Table 1.

Cohort characteristics by ever exposure to efavirenz

 Variable Ever-EFV *
(n = 305)
Only-NVP
(n = 389)
P-value

Demographic Characteristics
 Age, median (IQR) 32 (27, 40) 34 (28, 39) 0.165
 Female, n (%) 201 (65.9%) 283 (72.8%) 0.051
  Baseline pregnant 48 (25.3%) 41 (14.9%) 0.005
 Married, n (%) 169 (55.4%) 179 (46.0%) 0.014
 Educational attainment, n (%) 0.051
  None 54 (17.7%) 53 (13.6%)
  Some primary 95 (31.1%) 156 (40.1%)
  Completed primary 64 (21.0%) 85 (21.9%)
  Some secondary and higher 92 (30.2%) 95 (24.4%)
 Asset index, n (%) 0.014
  1st quintile (most poor) 46 (15.1%) 90 (23.1%)
  2nd quintile 57 (18.7%) 83 (21.3%)
  3rd quintile 60 (19.7%) 77 (19.8%)
  4th quintile 69 (22.6%) 77 (19.8%)
  5th quintile (least poor) 73 (23.9%) 62 (15.9%)
 Year of enrollment, n (%) < 0.001
  2005–07 68 (22.3%) 251 (64.5%)
  2008–10 32 (10.5%) 103 (26.5%)
  2011–13 205 (67.2%) 35 (9.0%)
Clinical Characteristics
 Efavirenz use at enrollment, n (%) 253 (83.0%) 9 (2.3%) < 0.001
 NRTI backbone at enrollment, n (%) < 0.001
  3TC + TDF 172 11
  3TC + AZT 117 285
  FTC + TDF 1 1
  3TC + D4T 15 92
 Probable depression at enrollment, n (%) 99 (32.5%) 129 (33.2%) 0.84
 Suicidal ideation at enrollment, n (%) 21 (6.9%) 26 (6.7%) 0.92
 Enrollment CD4+ count (cells/μL), median (IQR) 231 (126, 348) 151 (88, 219) < 0.001
 Enrollment viral load (log10 copies/mL), median (IQR) 0.83 (0.67, 1.00) 0.86 (0.67, 1.00) 0.75
 Tuberculosis co-infection 26 (8.5%) 8 (2.1%) < 0.001
 Physical Health Summary score§, median (IQR) 57.3 (48.6, 60.8) 54.7 (46.2, 58.9) 0.001
 Heavy drinking, n (%) 49 (16.7%) 74 (19.9%) 0.28
Follow-up Characteristics
 Duration of follow-up (weeks), median (IQR) 96 (95, 97) 96 (95, 97) 0.163
 Number of follow-up visits, median (IQR) 6 (6, 6) 7 (6, 8) < 0.001
 Number of follow-up visits without missing covariate data, median (IQR) 6 (4, 6) 7 (5, 7) < 0.001
 Proportion of follow-up visits with viral suppression, median (IQR) 0.83 (0.67, 1.00) 0.86 (0.67, 1.00) 0.75
 Died, n (%) 6 (2.0%) 11 (2.8%) 0.47
 Lost to follow-up**, n (%) 13 (4.3%) 40 (10.3%) < 0.001
 Total number of missing visits, n (%) 162 (10.6%) 423 (18.1%) < 0.001
 Number of missing visits per participant††, n (%) 0 (0, 1) 1 (0, 2) < 0.001
 Number of visits censored for missing covariate data per participant, n (%) 0 (0, 1) 0 (0, 0) <0.001

EFV = efavirenz; NVP = nevirapine; IQR = interquartile range; NRTI = nucleoside reverse transcriptase inhibitor; 3TC = lamivudine; TDF = tenofovir disoproxil; AZT = zidovudine; FTC = emtricitabine; D4T = stavudine

*

The ever-efavirenz group included participants who met criteria for efavirenz exposure for at least one follow-up visit in study period; the only-nevirapine group included participants who did not meet criteria for efavirenz exposure in any follow-up visits in study period

Asset index was calculated based on the methods described by Filmer and Pritchett (21).

Probable depression was defined as a score of >1.75 on the Hopkins Symptom Checklist-15 modified for the local Ugandan context (14–16,19,20).

The Physical Health Summary score was estimated using the Medical Outcomes Survey-HIV score (22).

Heavy drinking was based on the 3-item heavy consumption subset of the Alcohol Use Disorders Identification Test - Consumption screen (23).

Viral load suppression was defined by an undetectable viral load at the nearest visit after 2 months of antiretroviral therapy. The limit of detection ranged from 400 to 20 copies/mL as the study progressed, depending on the assay available at the time of the study visit.

**

Lost to follow-up was defined as not having a study visit 550 days after antiretroviral therapy initiation or having withdrawn from the study before 2 years.

††

The number of missed visits before the last recorded study visit. 1 missed visit was added if the last study visit was >3.5 months before the two-year time endpoint of the analysis.