Table 1.
Primers used for PCR and sequencing of MC1R, ASIP, and TYRP1.
| Gene symbol | Region | Forward 5′ – 3′ | Reverse 5′ – 3′ | Product |
|---|---|---|---|---|
| and primer ID | size, bp | |||
| MC1R 5′ UTR 1 | 5′ UTR | TCTCACGCCCTTTGAAGTCT | GCTGACGACAAACCCTTCTC | 2007 |
| MC1R 5′ UTR 2 | 5′ UTR | ACACACCTTAACGGGACACC | GCAGGAAAGGGTCTTCACTCT | 1101 |
| MC1R 1 | Exon 1 | TCCTCCTCTGTCTCGTCAGC | GTTGGCTGGCACTGTCTCC | 918 |
| MC1R 2 | Exon 1 | GGCGCTGTCTCTTGTGGAG | GACCAGAAGAGACGCAGGAG | 912 |
| MC1R 3 | Exon 1 | CTCCCTGGCAGGACGATG | AGTCCGAGGTGGGTGGTG | 92 |
| MC1R_OV∗ | Exon 1 | CATGGTGTCCAGCCTCTGCTCTCT | CACGGCGATAGCACCCAGAGAGCA | n/a |
| ASIP Prom | Promoter | GGATTTGGGGTCAGTCTGTA | CCCATCCCTTTAGCCTCCTA | 2608 |
| ASIP Ex1 | Exon 1 | GTGTGAGTCAGTGGCAGGAA | AAATTCTGGGTGGGCTAAGG | 1130 |
| ASIP Ex1b | Exon 1 | ACTTAAGGCAGGCTGGACCT | ATGTGCCCATCCCTTTAGC | 1502 |
| ASIPex1seq | Exon 1 | AGACCCTGCATTAAGCTGCTC | Sequencing primer | n/a |
| ASIPex1seqb | Exon 1 | GCTTTTCTGATAATGAAATA | Sequencing primer | n/a |
| ASIP Ex 2 | Exon 2 | CTTCAGTCTCCCTCCCTTCC | GCCAGGTATTTTTCCCTGAG | 828 |
| ASIP Ex 3 | Exon 3 | TCCAGGGCCTTATTGGACTT | CTGGAAAGGCTCAGTTTGCT | 953 |
| ASIP Ex 4 | Exon 4 | ACTGTAAGAGGGCCAGAGCA | TAAAGTAGGGGGCAGCATTG | 511 |
| TYRP1 Ex 1 | Exon 1 | AGCACTTTGAAGGTGGGTTG | AGTCAGAAGACTGGAGCATCAA | 698 |
| TYRP1 Ex 2 | Exon 2 | AAGAGAGGGAGTGGAAGGGAGA | ATGTGAAATTGCTTGGTCAGTG | 650 |
| TYRP1 Ex 3 | Exon 3 | TGAGTTGGGTTTCATTCCTT | CACTTTCTTTTTCCCCTGGA | 629 |
| TYRP1 Ex 4 | Exon 4 | TGGACATGGTAACTTGGGTTT | GGCCAGCAACCTAACTTTGA | 722 |
| TYRP1 Ex 5 | Exon 5 | GGCCACCAACCATAGGTACA | GACTTCCTGTCTGCCTTTTCA | 525 |
| TYRP1 Ex 6 | Exon 6 | CCTGGGCTGCTGTAGTGAA | CTGGGGGCTCTCAACAAACT | 500 |
| TYRP1 Ex 7 | Exon 7 | GGAATTAGGAAGTGCCCTGA | AACATGCCCCAAATCTTCAC | 595 |
Asterisk denotes overgo primers for screening MC1R from CHORI-246 BAC library.