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. 2019 Apr 16;10:340. doi: 10.3389/fgene.2019.00340

Table 1.

Primers used for PCR and sequencing of MC1R, ASIP, and TYRP1.

Gene symbol Region Forward 5′ – 3′ Reverse 5′ – 3′ Product
and primer ID size, bp
MC1R 5′ UTR 1 5′ UTR TCTCACGCCCTTTGAAGTCT GCTGACGACAAACCCTTCTC 2007
MC1R 5′ UTR 2 5′ UTR ACACACCTTAACGGGACACC GCAGGAAAGGGTCTTCACTCT 1101
MC1R 1 Exon 1 TCCTCCTCTGTCTCGTCAGC GTTGGCTGGCACTGTCTCC 918
MC1R 2 Exon 1 GGCGCTGTCTCTTGTGGAG GACCAGAAGAGACGCAGGAG 912
MC1R 3 Exon 1 CTCCCTGGCAGGACGATG AGTCCGAGGTGGGTGGTG 92
MC1R_OV Exon 1 CATGGTGTCCAGCCTCTGCTCTCT CACGGCGATAGCACCCAGAGAGCA n/a
ASIP Prom Promoter GGATTTGGGGTCAGTCTGTA CCCATCCCTTTAGCCTCCTA 2608
ASIP Ex1 Exon 1 GTGTGAGTCAGTGGCAGGAA AAATTCTGGGTGGGCTAAGG 1130
ASIP Ex1b Exon 1 ACTTAAGGCAGGCTGGACCT ATGTGCCCATCCCTTTAGC 1502
ASIPex1seq Exon 1 AGACCCTGCATTAAGCTGCTC Sequencing primer n/a
ASIPex1seqb Exon 1 GCTTTTCTGATAATGAAATA Sequencing primer n/a
ASIP Ex 2 Exon 2 CTTCAGTCTCCCTCCCTTCC GCCAGGTATTTTTCCCTGAG 828
ASIP Ex 3 Exon 3 TCCAGGGCCTTATTGGACTT CTGGAAAGGCTCAGTTTGCT 953
ASIP Ex 4 Exon 4 ACTGTAAGAGGGCCAGAGCA TAAAGTAGGGGGCAGCATTG 511
TYRP1 Ex 1 Exon 1 AGCACTTTGAAGGTGGGTTG AGTCAGAAGACTGGAGCATCAA 698
TYRP1 Ex 2 Exon 2 AAGAGAGGGAGTGGAAGGGAGA ATGTGAAATTGCTTGGTCAGTG 650
TYRP1 Ex 3 Exon 3 TGAGTTGGGTTTCATTCCTT CACTTTCTTTTTCCCCTGGA 629
TYRP1 Ex 4 Exon 4 TGGACATGGTAACTTGGGTTT GGCCAGCAACCTAACTTTGA 722
TYRP1 Ex 5 Exon 5 GGCCACCAACCATAGGTACA GACTTCCTGTCTGCCTTTTCA 525
TYRP1 Ex 6 Exon 6 CCTGGGCTGCTGTAGTGAA CTGGGGGCTCTCAACAAACT 500
TYRP1 Ex 7 Exon 7 GGAATTAGGAAGTGCCCTGA AACATGCCCCAAATCTTCAC 595

Asterisk denotes overgo primers for screening MC1R from CHORI-246 BAC library.