Table 2.

Average values and 95% confidence intervals for the quality measures of each haplotyping method, obtained by simulation at the sequencing depth of 5-5-2× (mother-father-offspring) per homolog.

	PopPoly	TriPoly	H-PoP	SDhaP
PAR	0.81(0.39;1)	0.71(0.35;1)	0.6(0.02;1)	0.44(0.04;0.93)
RR	0.95(0.8;1)	0.92(0.79;1)	0.89(0.7;1)	0.85(0.73;0.98)
SMR	0.1(0;0.33)	0.19(0;0.44)	0.33(0.04;0.64)	0.19(0;0.44)
IDR	0.09(0;0.31)	0.13(0;0.33)	0.2(0;0.69)	0.31(0;0.73)
NGPS	0.0009(0;0.001)	0.0009(0;0.001)	0.01(0;0.08)	0.01(0;0.08)