Table 2. Plasmids and cosmids used in the current study.
Plasmid/cosmid | Antibiotic resistance marker(s)a | Description | Source/Reference |
---|---|---|---|
pGEMT-Easy | AmpR | General E. coli cloning vector | Promega |
pET30b | KanR | E. coli protein expression vector | Novagen |
pHM11a | HygR | Integrative Streptomyces expression vector containing the constitutive ermEp* | [36] |
pSET152 | AprR | Integrative Streptomyces cloning vector | [37] |
pIJ773 | AprR | Template plasmid for preparing the ReDirect apra disruption cassette | [34] |
pIJ10700 | HygR | Template plasmid for preparing the ReDirect hyg disruption cassette | [34] |
pET30b-cpeSc | KanR | Plasmid vector used to express C-terminal 6×His-tagged Cpe in E. coli for purification | This study |
12B8 | AmpR, KanR | Cosmid clone containing the clavulanic acid biosynthetic gene cluster from S. clavuligerus | [19] |
12B8-Δcpe::apra | AprR, AmpR, KanR | Mutant cosmid 12B8 in which cpe has been replaced by the disruption cassette from plasmid pIJ773 using the ReDirect system | This study |
12B8-Δcpe-INF | AmpR, KanR | Mutant cosmid 12B8 in which cpe has been replaced by the 81-bp in-frame “scar” sequence using the ReDirect system | This study |
12B8-Δcpe-INF-Δamp::hyg | HygR, KanR | Cosmid 12B8-Δcpe-INF in which ampicillin resistance gene replaced by the hyg cassette from plasmid pIJ10700 using the ReDirect system | This study |
pHM:cpeSc | HygR | Expression plasmid pHM11a containing cpe from S. clavuligerus | This study |
pHM:cpeSf | HygR | Expression plasmid pHM11a containing cpe from S. flavogriseus | This study |
pHM:cpeSv | HygR | Expression plasmid pHM11a containing cpe from S. viridis | This study |
pHM:cpeSj | HygR | Expression plasmid pHM11a containing cpe from S. jumonjinensis | This study |
pHM:cpeSk | HygR | Expression plasmid pHM11a containing cpe from S. katsurahamanus | This study |
pHM:blipFLAG | HygR | Expression plasmid pHM11a containing blip from S. clavuligerus with a C-terminal FLAG tag | This study |
pHM:ccaRFLAG | HygR | Expression plasmid pHM11a containing ccaR from S. clavuligerus with a C-terminal FLAG tag | This study |
pHM:cpeSc-FLAG | HygR | Expression plasmid pHM11a containing cpe from S. clavuligerus with a C-terminal FLAG tag | This study |
pHM:cpeSc-6×his | HygR | Expression plasmid pHM11a containing cpe from S. clavuligerus with a C-terminal 6×His tag | This study |
pHM:cpeCt | HygR | Expression plasmid pHM11a containing the C-terminal domain of cpe from S. clavuligerus | This study |
pHM:cpeNt | HygR | Expression plasmid pHM11a containing the N-terminal domain of cpe from S. clavuligerus | This study |
pHM-cpeCt+Nt | HygR | Expression plasmid pHM11a containing the N-terminal and C- terminal domains of cpe from S. clavuligerus, each expressed independently under the control of the ermEp* | This study |
pSET:cpeSc | AprR | Plasmid pSET152 containing the S. clavuligerus cpe gene along with ermEp* from pHM11a was used as template to prepare all described cpeSc site directed mutants | This study |
aAmpR, ampicillin resistance; AprR, apramycin resistance; KanR, kanamycin resistance, HygR, hygromycin resistance.