Table 6.
BLASTN analysis of the lncRNA- XLOC_098131 sequence with the genomic sequence of multiple species.
| Species | Genomic location | Overlapping gene(s) | Orientation | Query start | Query end | Length | Score | E-val | %ID |
|---|---|---|---|---|---|---|---|---|---|
| Chicken (Gallus gallus) | 8:25819102-25821666 | Reverse | 757 | 3,321 | 2,565 | 5,085 | 0 | 100 | |
| 8:25825425-25826005 | Reverse | 1 | 581 | 581 | 1,152 | 0 | 100 | ||
| 8:25822459-25822638 | Reverse | 580 | 759 | 180 | 357 | 1.00E-95 | 100 | ||
| 6:10061666-10061723 | PRKG1 | Reverse | 1,122 | 1,179 | 58 | 83.8 | 2.00E-13 | 93.1 | |
| 2:102877343-102877419 | Forward | 1,122 | 1,199 | 78 | 83.8 | 2.00E-13 | 89.74 | ||
| 1:13229048-13229148 | RELN | Reverse | 1,122 | 1,222 | 102 | 83.8 | 2.00E-13 | 87.25 | |
| 1:188522666-188522723 | Forward | 1,122 | 1,179 | 58 | 83.8 | 2.00E-13 | 93.1 | ||
| 2:148971284-148971360 | ENSGALG00000046235 | Forward | 1,123 | 1,199 | 77 | 81.8 | 1.00E-12 | 88.31 | |
| 2:60329403-60329449 | Forward | 100 | 146 | 47 | 77.8 | 2.00E-11 | 95.74 | ||
| 2:146079337-146079383 | Forward | 1,122 | 1,168 | 47 | 77.8 | 2.00E-11 | 95.74 | ||
| Human (Homo sapiens) | 16:84600302-84600329 | Forward | 2,952 | 2,979 | 28 | 56 | 0.002 | 100 | |
| Mouse (Mus musculus) | 11:88368731-88368764 | Msi2 | Reverse | 3,005 | 3,038 | 34 | 60 | 2.00E-05 | 97.06 |
| Pig (Sus scrofa) | 10:12597715-12597743 | NVL | Forward | 2,963 | 2,991 | 29 | 50.1 | 0.007 | 96.55 |
| 8:75192172-75192196 | Reverse | 2,952 | 2,976 | 25 | 50.1 | 0.007 | 100 | ||
| 2:5886714-5886738 | Forward | 2,966 | 2,990 | 25 | 50.1 | 0.007 | 100 | ||
| 9:131770635-131770666 | Forward | 2,963 | 2,994 | 32 | 48.1 | 0.028 | 93.75 | ||
| 6:40493835-40493866 | ZNF536 | Forward | 2,963 | 2,994 | 32 | 48.1 | 0.028 | 93.75 | |
| 5:67610724-67610755 | Reverse | 2,963 | 2,994 | 32 | 48.1 | 0.028 | 93.75 | ||
| 1:91969563-91969590 | Forward | 486 | 513 | 28 | 48.1 | 0.028 | 96.43 | ||
| Cow (Bos taurus) | 18:4693512-4693539 | ADAMTS18 | Reverse | 2,963 | 2,990 | 28 | 48.1 | 0.03 | 96.43 |
| Sheep (Ovis aries) | 13:76463289-76463318 | PREX1 | Reverse | 2,950 | 2,979 | 30 | 52 | 0.002 | 96.67 |
| 1:142389415-142389447 | Reverse | 3,008 | 3,040 | 33 | 50.1 | 0.007 | 93.94 | ||
| 3:180456894-180456925 | Reverse | 2,963 | 2,994 | 32 | 48.1 | 0.029 | 93.75 | ||
| 26:36177735-36177762 | Forward | 2,952 | 2,979 | 28 | 48.1 | 0.029 | 96.43 |
Genomic location, location of the hit on the genome; Overlapping gene(s), genes that overlap the genomic location hit; Orientation, strand of the genome the query sequence is found on; Query start and end, positions within the query sequence where the alignment begins and ends (1-based, inclusive); Length, full length of the alignment, including all gaps in either the query or the alignment; Score, BLAST score calculated from the alignment; E-val, probability that the alignment between the query sequence and subject sequence is due to chance; %ID, percentage of the aligned query sequence that is identical to the subject sequence.