Table 2.
53 out of 77 (68.8%) circRNAs have significant homologies between flanking introns, which may facilitate chromatin looping and circRNA generation.
| Gene | circRNAdb ID | % identity | e-Value | Bitscore |
|---|---|---|---|---|
| circRNA expression increased, mRNA expression increased | ||||
| PARD3B | N/A | 98.44 | 0.00 | 4617 |
| SIPA1L3 | hsa_circ_10577 | 90.24 | 0.00 | 374 |
| circRNA expression decreased, mRNA expression increased | ||||
| FUT8 | hsa_circ_02544 | 93.17 | 0.00 | 429 |
| RELL1 | hsa_circ_08846 | 88.03 | 0.00 | 335 |
| FNDC3B | hsa_circ_15231 | 84.59 | 0.00 | 311 |
| circRNA expression increased, mRNA expression unchanged | ||||
| PCNXL2 | hsa_circ_10712 | 98.65 | 0.00 | 525 |
| RUNX1T1 | hsa_circ_02162 | 89.74 | 0.00 | 427 |
| DOCK1 | hsa_circ_00689 | 89.61 | 0.00 | 387 |
| TTC28 | hsa_circ_22261 | 89.6 | 0.00 | 375 |
| ATXN1 | hsa_circ_13397 | 89.45 | 0.00 | 300 |
| XXYLT1 | hsa_circ_02143 | 89.26 | 0.00 | 521 |
| ECSIT | hsa_circ_00599 | 88.63 | 0.00 | 361 |
| CUX1 | hsa_circ_12403 | 87.25 | 0.00 | 333 |
| EVI5 | hsa_circ_11187 | 86.53 | 0.00 | 363 |
| SMURF2 | hsa_circ_01208 | 86.23 | 0.00 | 324 |
| IQGAP1 | hsa_circ_10932 | 86.13 | 0.00 | 291 |
| TEX2 | hsa_circ_31354 | 85.26 | 0.00 | 316 |
| TBC1D8 | hsa_circ_32540 | 84.04 | 0.00 | 263 |
| TPST1 | hsa_circ_22617 | 83.83 | 0.00 | 560 |
| LZIC | hsa_circ_31394 | 83.55 | 0.00 | 278 |
| SCAF8 | hsa_circ_06913 | 83.05 | 0.00 | 261 |
| KANSL1L | hsa_circ_06859 | 82.95 | 0.00 | 191 |
| VRK1 | hsa_circ_08594 | 82.95 | 0.00 | 115 |
| DNAAF5 | N/A | 82.87 | 0.00 | 254 |
| PDS5A | hsa_circ_29001 | 82.68 | 0.00 | 257 |
| PPP6R2 | hsa_circ_07544 | 82.34 | 0.00 | 499 |
| ACVR2A | hsa_circ_04751 | 81.88 | 0.00 | 255 |
| VAMP3 | hsa_circ_18051 | 81.76 | 0.00 | 250 |
| PRKY | hsa_circ_30664 | 81.66 | 0.00 | 230 |
| CSNK1G3 | hsa_circ_08140 | 80.89 | 0.00 | 226 |
| PVT1 | hsa_circ_16350 | 76.23 | 0.00 | 619 |
| circRNA expression decreased, mRNA expression unchanged | ||||
| FAM13B | hsa_circ_11413 | 89.9 | 0.00 | 379 |
| SCMH1 | hsa_circ_12377 | 89.74 | 0.00 | 387 |
| N4BP2L2 | hsa_circ_12240 | 88.45 | 0.00 | 363 |
| ADAMTS6 | hsa_circ_28538 | 88.41 | 0.00 | 353 |
| PSD3 | hsa_circ_02851 | 87.66 | 0.00 | 351 |
| UBAP2 | hsa_circ_30156 | 87.63 | 0.00 | 326 |
| PTK2 | hsa_circ_23485 | 85.49 | 0.00 | 396 |
| ASAP1 | hsa_circ_09642 | 84.95 | 0.00 | 294 |
| MAN1A2 | hsa_circ_02643 | 84.03 | 0.00 | 272 |
| EPHB4 | hsa_circ_08510 | 82.08 | 0.00 | 257 |
| circRNA expression increased, mRNA expression decreased | ||||
| UGGT1 | N/A | 87.2 | 0.00 | 326 |
| RNF38 | hsa_circ_32756 | 86.81 | 0.00 | 318 |
| RNF138 | hsa_circ_01057 | 86.3 | 0.00 | 315 |
| SLF2 | N/A | 85.76 | 0.00 | 315 |
| RCAN3 | hsa_circ_22201 | 83.84 | 0.00 | 278 |
| PDS5B | hsa_circ_01546 | 82.06 | 0.00 | 254 |
| circRNA expression decreased, mRNA expression decreased | ||||
| RHOBTB3 | hsa_circ_19124 | 90.64 | 0.00 | 392 |
| ANKRD12 | hsa_circ_31497 | 85.86 | 0.00 | 313 |
| ANKRD17 | hsa_circ_01636 | 85.37 | 0.00 | 296 |
| CEP192 | hsa_circ_26363 | 84.76 | 0.00 | 307 |
| BMPR2 | hsa_circ_06837 | 81.99 | 0.00 | 503 |
| FGD4 | hsa_circ_21030 | 78.65 | 0.00 | 115 |