Table 5A.
All but one circRNA open reading frames with significant BLAST matches encode peptides from the same gene as their corresponding mRNAs.
Gene | circRNAdb ID | Accession | % ID | E-value | Same translation as mRNA? |
---|---|---|---|---|---|
Near-perfect overlap with known sequences | |||||
VAMP3 | hsa_circ_18051 | XP_016858330 | 100 | 0.00 | Yes |
DOCK1 | hsa_circ_00689 | Q14185 | 100 | 0.00 | Yes |
HNRNPM | hsa_circ_20744 | BAG57075 | 100 | 0.00 | Yes |
FOXP1 | hsa_circ_19469 | BAC11065 | 100 | 0.00 | Yes |
TBC1D8 | hsa_circ_32540 | BAA76517 | 100 | 0.00 | Yes |
KANSL1L | hsa_circ_06859 | XP_011509011 | 100 | 0.00 | Yes |
RUNX1T1 | hsa_circ_02162 | AAB34820 | 100 | 0.00 | Yes |
CSNK1G3 | hsa_circ_08140 | XP_016864559 | 100 | 0.00 | Yes |
TPST1 | hsa_circ_22617 | XP_011514936 | 100 | 0.00 | Yes |
RCAN3 | hsa_circ_22201 | NP_001238914 | 100 | 0.00 | Yes |
NEIL3 | hsa_circ_00262 | Q8TAT5 | 100 | 0.00 | Yes |
PPP6R2 | hsa_circ_07544 | EAW73534 | 100 | 0.00 | Yes |
VRK1 | hsa_circ_08594 | 2LAV_A | 100 | 0.00 | Yes |
BABAM1 | hsa_circ_04303 | BAG61451 | 100 | 0.00 | Yes |
RYK | hsa_circ_26048 | AAH21700 | 100 | 0.00 | Yes |
ATXN1 | hsa_circ_13397 | NP_000323 | 100 | 0.00 | Yes |
ACVR2A | hsa_circ_04751 | AAH67417 | 100 | 0.00 | Yes |
PRKY | hsa_circ_30664 | O43930 | 100 | 0.00 | Yes |
UBAP2 | hsa_circ_30156 | BAG64527 | 100 | 0.00 | Yes |
RELL1 | hsa_circ_08846 | XP_016864079 | 100 | 0.00 | Yes |
NFAT5 | hsa_circ_16704 | XP_016878362 | 100 | 0.00 | Yes |
CEP192 | hsa_circ_26363 | XP_016881293 | 100 | 0.00 | Yes |
SDF4 | hsa_circ_21644 | XP_011539858 | 100 | 0.00 | Yes |
CORO1C | hsa_circ_01619 | BAH14436 | 100 | 0.00 | Yes |
ADAMTS6 | hsa_circ_28538 | XP_011541429 | 100 | 0.00 | Yes |
ASAP1 | hsa_circ_09642 | CAD97831 | 100 | 0.00 | Yes |
MAN1A2 | hsa_circ_02643 | XP_016855604 | 100 | 0.00 | Yes |
ANKRD17 | hsa_circ_01636 | XP_016863500 | 99.796 | 0.00 | Yes |
ANKRD12 | hsa_circ_31497 | BAB15014 | 99.683 | 0.00 | Yes |
CRIM1 | hsa_circ_16396 | XP_016859748 | 99.448 | 0.00 | Yes |
PSD3 | hsa_circ_02851 | XP_016868754 | 99.333 | 0.00 | Yes |
PDS5B | hsa_circ_01546 | AAH70274 | 99.048 | 0.00 | Yes |
FNDC3B | hsa_circ_15231 | EAW78473 | 98.864 | 0.00 | Yes |
FUT8 | hsa_circ_02544 | BAA92858 | 98.551 | 0.00 | Yes |
PCNXL2 | hsa_circ_10712 | BAG51507 | 98.387 | 0.00 | Yes |
RHOBTB3 | hsa_circ_19124 | EAW96050 | 98.148 | 0.00 | Yes |
PTK2 | hsa_circ_23485 | NP_001339677 | 98.052 | 0.00 | Yes |
SCAP | hsa_circ_19380 | EAW64826 | 97.5 | 0.00 | Yes |
EPHB4 | hsa_circ_08510 | 4AW5_A | 97.5 | 0.00 | Yes |
IQGAP1 | hsa_circ_10932 | AAH05906 | 97.458 | 0.00 | Yes |
XXYLT1 | hsa_circ_02143 | XP_005269343 | 97.403 | 0.00 | Yes |
SMURF2 | hsa_circ_01208 | EAW94194 | 97.03 | 0.00 | Yes |
CNTROB | hsa_circ_09218 | XP_016879630 | 97.015 | 0.00 | Yes |
LZIC | hsa_circ_31394 | NP_001303904 | 96.97 | 0.00 | Yes |
TTC28 | hsa_circ_22261 | XP_011528324 | 96.947 | 0.00 | Yes |
PVT1 | hsa_circ_16350 | EAW92103 | 95.918 | 0.00 | No (non-coding gene) |
FAM13B | hsa_circ_11413 | XP_016865040 | 87.786 | 0.00 | Yes |
N4BP2L2 | hsa_circ_12240 | EAX08513 | 78.261 | 0.00 | Yes (fragment of same gene) |
Partial overlap with known sequences | |||||
BMPR2 | hsa_circ_06837 | NP_057675 | 56 | 3.10 | |
ESYT2 | hsa_circ_25060 | EAW95833 | 48 | 3.20 | |
GRHPR | hsa_circ_03935 | EAW60274 | 39.286 | 3.00 | |
No overlap with known sequences | |||||
RNF38 | hsa_circ_32756 | ||||
SIPA1L3 | hsa_circ_10577 | ||||
SCAF8 | hsa_circ_06913 | ||||
CDK8 | hsa_circ_27078 | ||||
ECSIT | hsa_circ_00599 | ||||
FGD4 | hsa_circ_21030 | ||||