Skip to main content
. 2019 Apr 5;8:e44558. doi: 10.7554/eLife.44558

Table 3. Publically available data for strong candidate U-box period regulators.

Circadian expression data is from the Diurnal Project gene expression tool (Mockler et al., 2007). Tissue specific expression is from the Arabidopsis eFP browser (Klepikova et al., 2016; Winter et al., 2007). The closest homolog was determined by WU-BLAST2 using BLASTP and the Araport11 protein sequences database.

Locus ID Gene name Circadian expression Tissue specific expression Closest homolog Publications (PMID)
LDHC LL_LDHC LL12_LDHH LL23_LDHH
Phase Correlation Phase Correlation Phase Correlation Phase Correlation Developmental map (eFP) Klepikova atlas Locus E-Value
AT5G18340 PUB48 19 0.68 17 0.86 20 0.63 14 0.86 Global, especially
young flower
and senescent
leaf
Young flower
bud,
Stamen, mature
leaf mature
petiole
AT5G18320 3.8 × 10−127 28077082
AT1G04510 MAC3A 20 0.84 18 0.72 23 0.48 14 0.83 Global Global AT2G33340 1.2 × 10−233 29437988
28947490
19629177
AT2G33340 MAC3B 15 0.49 8 0.56 17 0.80 8 0.73 Global Global AT1G04510 7.2 × 10−229 29437988
28947490
19629177
AT3G49810 PUB30 2 0.87 1 0.59 3 0.76 0 0.91 Global Everywhere
except young
seed and
young silique
AT5G65920 1.2 × 10−171 28865087
25410251