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. 2019 Apr 23;7:e6744. doi: 10.7717/peerj.6744

Table 2. Summary statistics per locus for genotypic clusters (*Nuc 1–*Nuc 5) defined with SAMOVA.

*Nuc 1 *Nuc 2 *Nuc 3 *Nuc 4 *Nuc 5
L A HO HE FIS A HO HE FIS A HO HE FIS A HO HE FIS A HO HE FIS
1 4 0.48 0.49 0.01 13 0.86 0.86 0.00 12 0.79 0.82 0.05 14 0.68 0.84 0.19 3 0.14 0.52 0.73
2 2 0.41 0.50 0.19 6 0.33 0.35 0.05 7 0.44 0.45 0.01 6 0.36 0.49 0.27 4 0.14 0.51 0.72
3 8 0.85 0.80 –0.06 15 0.78 0.85 0.08 25 0.83 0.91 0.09 13 0.54 0.79 0.32 5 0.64 0.75 0.15
4 2 0.52 0.50 –0.03 7 0.45 0.45 0.00 8 0.74 0.80 0.07 5 0.14 0.16 0.14 3 0.64 0.63 –0.02
5 3 0.78 0.68 –0.15 7 0.51 0.55 0.06 6 0.25 0.28 0.10 5 0.63 0.71 0.13 2 0.07 0.07 0.00
6 3 0.15 0.14 –0.05 11 0.77 0.84 0.09 10 0.50 0.66 0.25 11 0.72 0.84 0.14 2 0.29 0.48 0.41
7 6 0.59 0.62 N.A. 10 0.63 0.74 N.A. 14 0.55 0.74 N.A. 4 0.07 0.58 0.10 m m m N.A.
8 8 0.67 0.82 0.19 13 0.77 0.80 0.04 13 0.83 0.86 0.03 8 0.67 0.74 m m m N.A.
M 4.5 0.56 0.57 10.3 0.64 0.68 11.9 0.62 0.69 8.3 0.48 0.65 3.2 0.32 0.49
s.d. 2.5 0.22 0.22 3.3 0.19 0.20 6.0 0.21 0.22 3.9 0.26 0.23 1.2 0.26 0.23
n 27 105 131 64 14
AR 3.29 (2.64) 5.14 (3.98) 5.54 (4.65) 4.7 (3.19) 2.56 (1.38)
PA 0.29 (0.07) 0.62 (0.18) 0.96 (0.60) 0.76 (0.40) 0.53 (0.29)
Ne 35.1 (0–176) 8.5 (1.8–20.5) 15.8 (5.8–30.8) 22.5 (0–112.8) 1.9 (1.3–2.7)

Note:

L, Locus; A, Allele number; HO, Observed heterozygosity; HE, Expected heterozygosity; FIS, inbreeding coefficient; N.A., missing data; m, monomorphic locus; n, number of individuals; M, Mean; s.d., standard deviation; AR, Allele richness; PA, Private alleles mean (variance); Ne, Effective population size (Jackknife CI).