Table 4.
Genes altered by bed rest in Old subjects that correlate with change in leg lean mass
LLM Correlation |
|||||
---|---|---|---|---|---|
Ensembl ID | Gene Name | Biotype | Ensembl Description | R2 coefficient | P value |
ENSG00000155761 | SPAG17 | Protein_coding | Sperm associated antigen 17 | 0.297 | 0.003 |
ENSG00000110906 | KCTD10 | Protein_coding | Potassium channel tetramerization domain containing 10 | 0.265 | 0.006 |
ENSG00000276791 | CTD-2270P14.5 | lincRNA | 0.264 | 0.006 | |
ENSG00000204103 | MAFB | Protein_coding | MAF bZIP transcription factor B | 0.246 | 0.009 |
ENSG00000137834 | SMAD6 | Protein_coding | SMAD family member 6 | 0.231 | 0.011 |
ENSG00000113296 | THBS4* | Protein_coding | Thrombospondin 4 | 0.230* | 0.013* |
ENSG00000157538 | DSCR3 | Protein_coding | DSCR3 arrestin fold containing | 0.216 | 0.015 |
ENSG00000129991 | TNNI3 | Protein_coding | Troponin I3, cardiac type | 0.207 | 0.017 |
ENSG00000135469 | COQ10A | Protein_coding | Coenzyme Q10A | 0.205 | 0.018 |
ENSG00000180447 | GAS1 | Protein_coding | Growth arrest specific 1 | 0.201 | 0.019 |
ENSG00000100281 | HMGXB4 | Protein_coding | HMG-box containing 4 | 0.199 | 0.020 |
ENSG00000169436 | COL22A1 | Protein_coding | Collagen type XXII α1 chain | 0.199 | 0.020 |
ENSG00000182809 | CRIP2 | Protein_coding | Cysteine rich protein 2 | 0.187 | 0.024 |
ENSG00000134243 | SORT1 | Protein_coding | Sortilin 1 | 0.180 | 0.027 |
ENSG00000118298 | CA14 | Protein_coding | Carbonic anhydrase 14 | 0.180 | 0.027 |
ENSG00000154767 | XPC | Protein_coding | XPC complex subunit, DNA damage recognition and repair factor | 0.174 | 0.030 |
ENSG00000113273 | ARSB | Protein_coding | Arylsulfatase B | 0.165 | 0.035 |
ENSG00000042445 | RETSAT | Protein_coding | Retinol saturase | 0.163 | 0.037 |
ENSG00000261326 | LINC01355 | lincRNA | Long intergenic nonprotein coding RNA 1355 | 0.162 | 0.037 |
ENSG00000166797 | FAM96A | Protein_coding | Family with sequence similarity 96 member A | 0.161 | 0.038 |
ENSG00000156463 | SH3RF2 | Protein_coding | SH3 domain containing ring finger 2 | 0.159 | 0.040 |
ENSG00000255874 | LINC00346 | lincRNA | Long intergenic nonprotein coding RNA 346 | 0.158 | 0.040 |
ENSG00000166148 | AVPR1A | Protein_coding | Arginine vasopressin receptor 1A | 0.149 | 0.047 |
ENSG00000151458 | ANKRD50 | Protein_coding | Ankyrin repeat domain 50 | 0.148 | 0.048 |
ENSG00000163807 | KIAA1143 | Protein_coding | KIAA1143 | 0.148 | 0.048 |
ENSG00000166780 | C16orf45 | Protein_coding | Chromosome 16 open reading frame 45 | 0.147 | 0.048 |
ENSG00000248309 | MEF2C-AS1 | Antisense | MEF2C antisense RNA 1 | 0.147 | 0.048 |
ENSG00000119669 | IRF2BPL | Protein_coding | Interferon regulatory factor 2 binding protein like | 0.146 | 0.049 |
ENSG00000162377 | COA7 | Protein_coding | Cytochrome-c oxidase assembly factor 7 (putative) | 0.146 | 0.049 |
ENSG00000163596 | ICA1L | Protein_coding | Islet cell autoantigen 1 like | 0.145 | 0.050 |
n = 9 Young, 18 Old. Statistical design included age + age:nested + age:time. Fold changes were determined with maximum-likelihood estimates of the log2 fold change. lincRNA, long intergenic noncoding RNA LLM, leg lean mass. An adjusted P value of P < 0.05 was required for a gene to be considered significantly altered.
One outlier removed from Young.