Table 2.
Codon usage for ORFs of S5, S7 and S9 in Rice black-streaked dwarf virus and Southern rice black-streaked dwarf virus
Virus | ORFs | ENC | CBI | GC3S | GCC |
---|---|---|---|---|---|
RBSDV | ORF5–1 | 49.982 | 0.323 | 0.329 | 0.372 |
ORF5–2 | 55.334 | 0.312 | 0.384 | 0.378 | |
ORF7–1 | 45.780 | 0.498 | 0.231 | 0.354 | |
ORF7–2 | 39.958 | 0.598 | 0.227 | 0.324 | |
ORF9–1 | 47.382 | 0.422 | 0.298 | 0.356 | |
ORF9–2 | 43.354 | 0.541 | 0.189 | 0.296 | |
SRBSDV | ORF5–1 | 51.455 | 0.323 | 0.365 | 0.379 |
ORF5–2 | 46.595 | 0.342 | 0.334 | 0.360 | |
ORF7–1 | 41.394 | 0.569 | 0.210 | 0.343 | |
ORF7–2 | 43.882 | 0.539 | 0.217 | 0.304 | |
ORF9–1 | 45.992 | 0.445 | 0.291 | 0.356 | |
ORF9–2 | 47.494 | 0.516 | 0.256 | 0.322 |