Table 6.

A comparison of KEGG pathway enrichment results between the second community of Louvain (L2) with 1472 genes and the second community of Spinglass (S2) with 1473 genes for the Yeast PPI network. The numbers inside parenthesis after L2 and S2 represent the number of genes that DAVID could annotate, which is generally less than the number of genes in those communities. The first column lists the broad category of pathways (GIP: Genetic Information Processing). Many pathways enriched in L2 and S2 have good overlap (a large number of genes are common). FE: Fold Enrichment. False Discovery Rate (FDR) values for all pathways and both communities are approximately 1.05E+3 times p-value