Table 1. Brief characteristics of available molecular gene editing tools.
Tool | Mechanism | Advantages | Limitations |
---|---|---|---|
Recombinases | |||
Cre-LoxP, Flp-FRT, Nigri/nox, Panto/pox and others | Induce recombination between target sites | Conditional gene modification possible | Difficult to find highly specific promoters, costly, and time consuming |
Nucleases | |||
ZFN | Recognize a specific site on DNA through zinc finger domains and introduce a double-stranded break | Gene targeting with good efficacy | Off-target activity, technical difficulty to create ZFN modules, difficulty to replace large fragments of DNA, high cost |
TALENs | Cleave DNA between TALEN binding sites | A simpler and faster design compared to ZFN facilitated by the creation of “TALEN library” | Off-target activity, relatively large size complicates the delivery |
CRISPR/Cas9 | Cas9 is guided by RNA and cleaves DNA at designed sites | Ease of use: can be adapted to target any DNA site by changing the guide RNA | Relatively large size of the protein complex, off-target cleavage |
ZFN: zinc finger nucleases; TALENs: transcriptional activator-like effector nucleases; CRISPR/Cas9: clustered regularly interspaced short palindromic repeat/CRISPR-associated protein 9.