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. 2019 Apr 25;52(5):e8108. doi: 10.1590/1414-431X20198108

Table 1. Brief characteristics of available molecular gene editing tools.

Tool Mechanism Advantages Limitations
Recombinases
Cre-LoxP, Flp-FRT, Nigri/nox, Panto/pox and others Induce recombination between target sites Conditional gene modification possible Difficult to find highly specific promoters, costly, and time consuming
Nucleases
ZFN Recognize a specific site on DNA through zinc finger domains and introduce a double-stranded break Gene targeting with good efficacy Off-target activity, technical difficulty to create ZFN modules, difficulty to replace large fragments of DNA, high cost
TALENs Cleave DNA between TALEN binding sites A simpler and faster design compared to ZFN facilitated by the creation of “TALEN library” Off-target activity, relatively large size complicates the delivery
CRISPR/Cas9 Cas9 is guided by RNA and cleaves DNA at designed sites Ease of use: can be adapted to target any DNA site by changing the guide RNA Relatively large size of the protein complex, off-target cleavage

ZFN: zinc finger nucleases; TALENs: transcriptional activator-like effector nucleases; CRISPR/Cas9: clustered regularly interspaced short palindromic repeat/CRISPR-associated protein 9.