Table 2.
Assembly Statistics for the Developmental Transcriptome of Lytechinus pictus
| Sequencing | Total Reads | 129,856,831 |
|---|---|---|
| Trimming | Dropped Reads | 837,154 |
| Both Surviving | 113,415,437 | |
| Assembly | Assembler | Trinity |
| kmer size | 25 | |
| Total Trinity Transcripts | 294,633 | |
| Total Trinity Genes | 188,907 | |
| Percent GC | 38.12 | |
| All transcript contigs | N5O | 1681 |
| Max length | 40,649 | |
| Mean length | 866.77 | |
| Median length | 403 | |
| Assembled bases | 255,377,848 | |
| Assembly quality assessment | Transrate score | 0.0473 |
| Transcripts with ORF (transrate) | 40,526 | |
| BUSCO score | C:98.7%, F:0.8%, M:0.5% |