Figure 1:

Scenario 1: 100 independent simulations of 2 outbred cousins across variable sequencing depth and informative sites with a MAF cutoff on 10%. J₉ to J₁ refer to the 9 Jacquard coefficients, R is the relatedness, and F₁ and F₂ refer to the individual inbreeding coefficients. Simulation (green) are the true values against which we compare ngsRelateV1 (red) and the new program ngsRelateV2 (blue).