Table 3.
Chr | Strongest SNP | Position | EA | EAF | OR or BETA | p value | n | Closest gene | Ref. |
---|---|---|---|---|---|---|---|---|---|
a 1 |
Europeans rs11206510 |
55030366 | T | 0.85 | 1.08 | 2.34E–08 | 188,372 | PCSK9 | [19] |
1 | rs17114036 | 56497149 | A | 0.91 | 1.17 | 3.81E–19 | 133,226 | PPAP2B | [47] |
1 | rs629301 | 109275684 | NA | NA | NA | 1.00E–49 | NA | CELSR2 | [78] |
1 | rs11810571 | 151789832 | G | 0.79 | 1.06 | 4.34E–08 | 345,035 | TDRKH | [20] |
1 | rs6689306 | 154423470 | A | 0.44 | 1.05 | 1.50E–09 | NA | IL6R | [20] |
2 | rs16986953 | 19742712 | A | 0.07 | 1.11 | 4.80E–10 | NA | AK097927 | [20] |
2 | rs7568458 | 85561052 | A | 0.45 | 1.06 | 2.40E–13 | NA | VAMP5, VAMP8, GGCX | [20] |
2 | rs17678683 | 144528992 | G | 0.09 | 1.10 | 3.00E–09 | 179,585 | ZEB2, ACO74093.1 | [19] |
2 | rs1250229 | 215439661 | T | 0.26 | 1.07 | 2.88E–13 | 270,189 | FN1 | [20] |
3 | rs7623687 | 49411133 | A | 0.86 | 1.08 | 3.54E–10 | 333,836 | RHOA | [20] |
3 | rs142695226 | 124756354 | G | 0.14 | 1.07 | 1.58E–09 | 345,188 | UMPS, ITGB5 | [20] |
3 | rs9818870 | 138403280 | T | 0.15 | 1.15 | 7.44E–13 | 40,773 | MRAS | [44] |
3 | rs12493885 | 154122077 | C | 0.87 | 1.07 | 3.23E–08 | 251,805 | ARHGEF26 | [20] |
4 | rs17087335 | 56972417 | T | 0.21 | 1.06 | 4.60E–08 | NA | NOA1, REST | [19] |
4 | rs10857147 | 80259918 | T | 0.27 | 1.05 | 5.81E–09 | 345,133 | PRDM8, FGF5 | [20] |
4 | rs7678555 | 119988346 | C | 0.28 | 1.05 | 1.35E–08 | 345,126 | PDE5A, MAD2L1 | [20] |
4 | rs6841581 | 147480038 | A | 0.15 | 1.07 | 4.60E–10 | NA | EDNAA | [20] |
6 | rs6909752 | 22612400 | A | 0.33 | 1.05 | 2.26E–09 | 343,171 | HDGFL1 | [20] |
6 | rs17609940 | 35067023 | G | 0.75 | 1.07 | 1.36E–08 | 137,412 | ANKS1A | [47] |
6 | rs56336142 | 39166323 | T | 0.81 | 1.07 | 1.85E–08 | 188,349 | KCNK5 | [19] |
6 | rs12190287 | 133893387 | C | 0.62 | 1.08 | 1.70E–12 | 130,888 | TCF21 | [47] |
6 | rs10455872 | 160589086 | G | 0.07 | 1.31 | 1.70E–49 | NA | LPA | [20] |
6 | rs4252185 | 160702419 | C | 0.06 | 1.34 | 1.64E–32 | NA | PLG | [19] |
7 | rs2107595 | 19009765 | A | 0.18 | 1.08 | 3.40E–13 | NA | HDAC9 | [20] |
7 | rs11556924 | 130023656 | C | 0.62 | 1.09 | 9.18E–18 | 134,200 | ZC3HC1 | [47] |
7 | rs3918226 | 150993088 | T | 0.07 | 1.13 | 1.60E–12 | NA | NOS3 | [20] |
8 | rs2954029 | 125478730 | A | 0.54 | 1.06 | 5.20E–13 | NA | TRIB1 | [20] |
9 | rs579459 | 133278724 | C | 0.21 | 1.10 | 4.08E–14 | 123,978 | ABO | [47] |
10 | rs2505083 | 30046193 | C | 0.39 | 1.06 | 6.85E–09 | 169,421 | KIAA1462 | [19] |
10 | rs501120 | 44258419 | T | 0.87 | 1.33 | 9.46E–08 | 7,181 | CXCL12 | [17] |
10 | rs2246942 | 89245129 | G | 0.35 | 1.08 | 3.50E–16 | NA | LIPA | [20] |
10 | rs12413409 | 102959339 | G | 0.89 | 1.12 | 1.03E–09 | 129,741 | NT5C2, CNNM2, CYP17A1 | [47] |
11 | rs10840293 | 9729649 | A | 0.55 | 1.05 | NA | SWAP70 | [20] | |
11 | rs3993105 | 13281524 | T | 0.68 | 1.05 | 4.88E–08 | 340,699 | ARNTL | [20] |
11 | rs974819 | 103789839 | T | 0.32 | 1.07 | 2.41E–09 | 64,881 | PDGFD | [46] |
11 | rs964184 | 116778201 | NA | NA | NA | 2.00E–108 | NA | ZPR1 | [78] |
12 | rs3184504 | 111446804 | T | 0.42 | 1.07 | 1.03E–09 | NA | SH2B3 | [19] |
12 | rs11830157 | 117827636 | G | 0.36 | 1.12 | 2.12E–09 | NA | KSR2 | [19] |
12 | rs2244608 | 120979185 | G | 0.35 | 1.05 | 7.90E–10 | 345,106 | HFN1A | [20] |
13 | rs1924981 | 28448508 | T | 0.33 | 1.05 | 1.90E–07 | NA | FLT1 | [20] |
14 | rs2895811 | 99667605 | C | 0.43 | 1.07 | 1.14E–09 | 114,238 | HHIPL1 | [47] |
15 | rs56062135 | 67163292 | C | 0.79 | 1.07 | 4.52E–09 | 184,037 | SMAD3 | [19] |
15 | rs7164479 | 78830712 | T | 0.58 | 1.07 | 6.40E–18 | NA | ADAMTS7 | [20] |
15 | rs8042271 | 89030987 | G | 0.90 | 1.10 | 3.68E–08 | 162,206 | MFGE8, ABHD2 | [19] |
15 | rs17514846 | 90873320 | A | 0.44 | 1.05 | 3.10E–07 | NA | FURIN, FES | [19] |
16 | rs7500448 | 83012185 | A | 0.77 | 1.06 | 4.90E–10 | 337,399 | CDH13 | [20] |
17 | rs216172 | 2223210 | C | 0.37 | 1.07 | 1.15E–09 | 111,538 | SMG6, SRR | [47] |
17 | rs46522 | 48911235 | T | 0.53 | 1.06 | 1.81E–08 | 137,633 | UBE2Z | [47] |
17 | rs7212798 | 60936127 | C | 0.15 | 1.08 | 1.88E–08 | 188,377 | BCAS3 | [19] |
18 | rs8082812 | 8522684 | NA | NA | NA | 5.00E–67 | NA | THEM1S3P - AKR1B1P6 | [78] |
18 | rs663129 | 60171168 | A | 0.26 | 1.06 | 3.20E–08 | NA | PMA1P1, MC4R | [19] |
19 | rs6511720 | 11091630 | G | 0.88 | 1.14 | 7.90E–22 | NA | LDLR | [20] |
19 | rs12976411 | 32391114 | A | 0.09 | 1.49 | 1.18E–14 | NA | ZNF507, LOC400684 | [19] |
19 | rs8108632 | 41348629 | T | 0.48 | 1.05 | 4.13E–08 | 345,058 | TGFB1 | [20] |
19 | rs4420638 | 44919689 | NA | NA | NA | 1.00E–22 | NA | APOC1 – APOC1P1 | [78] |
19 | rs1964272 | 45687010 | G | 0.52 | 1.05 | 2.52E–08 | 343,548 | SNAPD2 | [20] |
21 | rs28451064 | 34221526 | A | 0.12 | 1.14 | 2.60E–23 | NA | KCNE2 | [20] |
21 | rs460976 | 41463567 | NA | NA | NA | 1.00E–08 | NA | MX1 - TMPRSS2 | [78] |
22 | rs180803 | 24262890 | G | 0.97 | 1.20 | 1.64E–10 | 174,076 | POM121L9P, ADORA2A | [19] |
bAsians | |||||||||
2 | rs2123536 | 19745816 | T | 0.39 | 1.12 | 6.83E–11 | 33,466 | TTC32, WDR35 | [48] |
4 | rs1842896 | 155590307 | T | 0.76 | 1.14 | 1.26E–11 | 33,466 | GUCY1A3 | [48] |
6 | rs9349379 | 12903725 | G | 0.349 | 1.34 | 8.02E–10 | 4,496 | PHACTR1 | [79] |
6 | rs9268402 | 32373576 | G | 0.59 | 1.16 | 2.77E–15 | 33,466 | BTNL2, C6orf10 | [48] |
6 | rs12524865 | 133875536 | C | 0.61 | 1.11 | 1.87E–07 | 24,724 | TCF21 | [48] |
9 | rs10738607 | 22088095 | G | 0.64 | 0.78 | 2.37E–08 | 1,237 | CDKN2A, CDKN2B | [80] |
12 | rs7136259 | 89687411 | T | 0.39 | 1.11 | 5.68E–10 | 33,466 | ATP2B1 | [48] |
12 | rs3782889 | 110912851 | C | 0.21 | 1.26 | 3.95E–14 | 13,742 | MYL2 | [81] |
12 | rs671 | 111803962 | A | 0.23 | 1.43 | 1.6E–34 | 12,041 | ALDH2 | [82] |
12 | rs11066280 | 112379979 | A | 0.17 | 1.19 | 1.69E–11 | 24,741 | C12orf51 | [48] |
Chr, chromosome; EA, effect allele; EAF, effect allele frequency; NA, not available.