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. 2018 Mar 12;24(7):586–597. doi: 10.1111/cns.12840

Table 1.

MicroRNA sequencing analysis of the mouse prefrontal cortex (PFC) astrocytes in response to acute phencyclidine (PCP) treatment

MATURE miRNA ID PRE‐ACC MATURE‐SEQ PCP vs Control fold change
PCP vs Control 2.0‐fold change Upregulated miRNAs
mmu‐miR‐212‐5p MI0000696 ACCUUGGCUCUAGACUGCUUACU 4.06
mmu‐miR‐127‐3p MI0000154 UCGGAUCCGUCUGAGCUUGGCU 2.90
mmu‐miR‐183‐5p MI0000225 UAUGGCACUGGUAGAAUUCACU 2.48
mmu‐miR‐298‐5p MI0000398 GGCAGAGGAGGGCUGUUCUUCCC 2.46
mmu‐miR‐381‐3p MI0000798 UAUACAAGGGCAAGCUCUCUGU 2.42
mmu‐miR‐338‐3p MI0000619 UCCAGCAUCAGUGAUUUUGUUG 2.40
mmu‐let‐7d‐3p MI0000405 CUAUACGACCUGCUGCCUUUCU 2.38
mmu‐miR‐132‐3p MI0000158 UAACAUGCUACAGCCAUGGUCG 2.22
mmu‐miR‐130a‐3p MI0000156 CAGUGCAAUGUUAAAAGGGCAU 2.19
mmu‐miR‐744‐5p MI0004124 UGCGGGGCUAGGGCUAACAGCA 2.17
mmu‐miR‐330‐5p MI0000607 UCUCUGGGCCUGUGUCUUAGGC 2.13
mmu‐miR‐335‐3p MI0000817 UUUUUCAUUAUUGCUCCUGACC 2.06
mmu‐miR‐29c‐3p MI0000577 UAGCACCAUUUGAAAUCGGUUA 2.04
mmu‐miR‐181a‐1‐3p MI0000697 ACCAUCGACCGUUGAUUGUACC 2.04
mmu‐miR‐872‐5p MI0005549 AAGGUUACUUGUUAGUUCAGG 2.00
PCP vs Control 2.0‐fold change Downregulated miRNAs
mmu‐miR‐143‐3p MI0000257 UGAGAUGAAGCACUGUAGCUC 0.26
mmu‐miR‐15a‐5p MI0000564 UAGCAGCACAUAAUGGUUUGUG 0.45
mmu‐miR‐1968‐5p MI0009965 UGCAGCUGUUAAGGAUGGUGGACU 0.50
mmu‐miR‐582‐3p MI0006127 UAACCUGUUGAACAACUGAAC 0.50

GFAP‐GFP transgenic mouse brains were rapidly removed 30 min after subcutaneous injection with PCP (4 mg/kg) or saline as control. GFP positive astrocytes were sorted by flow cytometry from prefrontal cortex. RNA was extracted from sorted astrocytes and used to prepare the miRNA sequencing libraries. The libraries were captured on Illumina flow cells, amplified in situ as clusters and finally sequenced for 36 cycles on Illumina HiSeq following the manufacturer's instructions. Trimmed reads were alignment to the miRBase pre‐miRNAs. miRNA read counts were normalized as tag counts per million miRNA alignments. Differentially expressed miRNAs (PCP vs Control >2.0 fold changes) were presented in the table.