A: Vegetative cells of B. subtilis grow and divide at midcell (a and a’) but at the onset of sporulation the cells switch to a polar division that forms a smaller forespore (the future spore) and a larger mother cell (b). Later stages in spore differentiation include; c, initiation of engulfment; d, engulfment completion; e, formation of phase dark spores; f, final stages in the assembly of the spore protective structure; g, free spores. The main spore structures are represented at the end of the sequence. The stages in which the mother cell-specific regulatory proteins σE and σK are active are also shown. B: Reaction cycle of Tgl. The active site (only the catalytic Cys116 residues is represented) is located within a tunnel that transverses the molecule from side to side. A Gln-containing substrate (the acceptor or Q-substrate in protein A) binds to the enzyme from one side of the tunnel and forms an acyl-enzyme intermediate with the catalytic Cys116. A Lys-containing substrate (the donor or K-substrate in protein B, but note that inter-molecular reactions are also possible) then approaches the enzyme from the opposite side of the tunnel and attacks the thiolester bond, leading to the formation of a ε-(γ-glutamyl)lysil isopeptide bond between A and B. Lastly, the cross-linked substrate is released [14]. C: The figure illustrates the role of morphogenetic proteins SafA, CotE and CotZ in recruiting the inner, outer and crust proteins during spore coat assembly; SafA and CotE interact directly with the encasement protein SpoVID. SpoVM and SpoIVA are not represented for simplicity (see text for details). C30, GerQ (σE-controlled, pink) and YeeK (σK-dependent, grey) are SafA-dependent, inner coat proteins. D: structural organization of SafA. The full-length protein, SafAFL, carries a localization signal at the N-terminal end, formed by a peptidoglycan-binding LysM domain and region A, which binds to the encasement protein SpoVID [28, 29, 49]. The internal Met codons M161 and M164 can direct production of a short form of the protein, termed C30, through internal translation of the safA mRNA. C30 binds to SafAFL and is recruited to the coat in this way. Concomitant with the production of C30, a third form of the protein, N21, is also formed [28].