. 2019 May 1;6:60. doi: 10.1038/s41438-019-0136-4

Table 3.

Details of the most significant single nucleotide polymorphism (SNP) markers associated with resistance to Phytophthora cactorum identified in the preliminary genome-wide association study of 114 individuals, identified by both PLINK⁴⁵ and TASSEL⁴⁶ analyses

Fragaria × ananassa linkage group	Position on Fragaria vesca v1.1 (bp)	Most significant SNP probe	PLINK⁴⁵		TASSEL⁴⁶		IStraw35 marker?
Fragaria × ananassa linkage group	Position on Fragaria vesca v1.1 (bp)	Most significant SNP probe	Raw p value	FDR BH p value	Raw p value	FDR BH p value	IStraw35 marker?
LG5D	2 411 572	Affx-88859864	1.06e−05	0.0956	3.24e−06	0.0673	No
LG7A	14 759 809	Affx-88897773	1.51e−06	0.0271	2.89e−05	0.1708	Yes
LG7A	14 946,159	Affx-88897860	1.41e−06	0.0271	2.97e−06	0.0673	Yes
LG7D	19,557,035	Affx-88900641	6.98e−06	0.0839	9.72e−05	0.2734	Yes

Raw p values and false-discovery rate Benjamini–Hochberg (FDR BH) p values are shown