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. 2019 Apr 26;8(5):giz042. doi: 10.1093/gigascience/giz042

Figure 1:

Figure 1:

Data processing workflow and website generation. (A) Quality-filtered sequences were obtained from either the QIITA or from another public repository and trimmed and filtered using SHI7. Reference-based OTUs were picked using BURST with the NCBI RefSeq and Greengenes 97 (GG 97) databases. (B) Individual GitHub Markdown pages were generated from dataset and task lists with a custom Python script and Jinja2 template, then uploaded to GitHub to be hosted.