Table 2.
Fraction no. | Mass, kDa (number of subunits)
|
|
---|---|---|
Sedimentation equilibrium (weight average) | STEM (no. average) | |
50 | 396.9 (2.98) | |
51 | 430.2 (3.23) | 387 (2.91) |
52 | 406.3 (3.05) | |
53 | 405.1 (3.05) |
The mass of SIV SU (shed from the virion surface after incubation at 60°C for 1 h) was determined by mass spectrometry (103 kDa, D. Sheeley and R.J.C., unpublished data), allowing the average mass for each potential N-linked glycosylation site to be calculated. This value was then multiplied by the number of potential N-linked glycosylation sites (26 sites) and added to the protein molar mass (known from the amino acid sequence data) of virion-associated SIV env to give an estimate of the monomer mass (133 kDa).