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. Author manuscript; available in PMC: 2019 May 2.
Published in final edited form as: J Phys Chem B. 2019 Feb 14;123(8):1797–1807. doi: 10.1021/acs.jpcb.8b12220

Figure 6.

Figure 6.

Implied time scale plots for (a) C-Cap, (b) N-Cap1, and (c) N-Cap2. Shown are implied relaxation times from MSMs built using different lag times. Six slow motions in total are shown in different colored lines. Uncertainty estimates (standard deviations shown as shaded regions) were calculated using a bootstrap procedure, whereby 20 different MSMs were constructed by sampling the input trajectories with replacement.