Area |
A; the two-dimensional area of the nucleus |
Perimeter |
P; the length of the nuclear perimeter |
Max feret diameter |
the maximum caliper diameter across the nucleus |
Min diameter |
the shortest caliper diameter through the center of mass of the nucleus |
Variability |
√(((∑(d²))/L); the square root of the sum-of-squares difference (d) at each index between the nuclear profile and the dataset median profile, after normalization to a fixed length (L) |
Ellipticity |
H/W; the height (H) divided by width (W) of the nuclear bounding box when the nucleus is vertically oriented |
Circularity |
4πA/P²; the closeness of the nucleus to a circle, between 0 and 1, where 1 is a perfect circle. |
Bounding width |
W; the width of the bounding rectangle of the vertically oriented nucleus |
Bounding height |
H; the height of the bounding rectangle of the vertically oriented nucleus |
Angle between reference points |
the angle between the tip, the centre of mass, and the caudal reference point (defined as the point of greatest curvature at the rear of the sperm head) |
Length of hook [rodent sperm only] |
the distance from the vertical alignment region to the x-edge of the bounding rectangle on the hook side (Figure 1D) |
Width of body [rodent sperm only] |
the distance from the vertical region to the x-edge of the bounding rectangle on the body side (Figure 1D) |
Segment lengths |
the length of each segment along the perimeter of the nucleus |