Table 4.
Genome-wide significant loci using PC-GWAS approach.
| Peak SNP | AF | Association count | Chr | BP (GRCh37) | Gene | Pooled analysis P-value |
|---|---|---|---|---|---|---|
| rs7296503 | 0.723 | 2 | 12 | 41700764 | PDZRN4+ | 2.10E-09 |
| rs112505971 | 0.948 | 21 | 10 | 27357470 | ANKRD26 | 1.81E-08 |
| rs4837892 | 0.652 | 1 | 9 | 124588304 | TTLL11 | 2.99E-08 |
| rs9917425 | 0.819 | 4 | 20 | 16736045 | OTOR+ | 6.77E-10 |
| rs3840870 | 0.556 | 1 | 17 | 48262183 | COL1A1 | 1.19E-08 |
| rs334 | 0.923 | 22 | 11 | 5244665 | HBB∗+ | 1.15E-12 |
| rs76792961 | 0.897 | 209 | 16 | 293593 | ITFG3∗+ | 6.70E-26 |
| rs2853961 | 0.603 | 1 | 6 | 31231989 | HLA-C∗+ | 4.25E-08 |
∗Known association; AF, allele frequency. +Locus remain significant after applying Bonferroni corrected threshold of 3.33 × 10−9.