Table 1.
Two east Asian genetic variants that alter alcohol metabolism
ALDH2 gene | ADH1B gene | ||
---|---|---|---|
Enzyme* | ALDH2, an aldehyde dehydrogenase | ADH1, an alcohol dehydrogenase | |
Enzyme function | Acetaldehyde breakdown, by oxidation to acetate | Alcohol breakdown, by oxidation to acetaldehyde | |
Description of variants | |||
SNP identifier | rs671 | rs1229984 | |
Nucleotide change | G→A | G→A | |
Amino acid change† | Glu504→Lys | Arg48→His | |
Enzyme activity change | Decreased substantially | Increased substantially | |
Alcohol clearance rate | Unaffected | Accelerated | |
Acetaldehyde clearance rate | Decreased substantially | Unaffected | |
Alcohol intake | Reduced substantially | Reduced‡ |
ALDH=aldehyde dehydrogenase. ADH=alcohol dehydrogenase. SNP=single nucleotide polymorphism.
ALDH2 is a tetramer of the ALDH2 gene product that requires all four parts to be functional, so a loss-of-function variant is nearly dominant. ADH1 is a dimer that requires two functional parts from the products of any of three similar genes, ADH1A, ADH1B, and ADH1C.
For ALDH2 and ADH1B, each of these amino acid changes can be described as altering the “*1” into the “*2” enzyme isoform.
The ADH1B-rs1229984 east Asian variant is nearly dominant, with AA and AG having similar effects on alcohol intake.