TABLE 1.

Example pass-filter sequencing read numbers for multiple-HPV-type reaction mixtures containing 500-bp synthetic dsDNA control fragments^a

10-copy HPV type	10K-copy HPV types	No. of pass-filter sequencing reads for:
		10-copy type	10K-copy HPV type
			1	2	3	4	5
6	31, 44, 58, 68b, 81	13,960	27,989	36,273	10,510	13,310	16,258
11	32, 45, 59, 69, 82	7,885	15,595	28,385	22,554	15,510	13,559
16	35, 52, 62, 71, 83	23,270	16,563	12,738	24,447	5,200	4,032
18	39, 53, 64, 72, 84	20,277	19,995	3,075	2,092	2,904	1,442
31	44, 58, 68b, 81, 89	23,436	33,959	12,639	11,806	18,545	4,572
33	51, 61, 70, 82v, 91	20,886	28,692	8,566	28,812	10,283	10,923
35	52, 62, 71, 83, 97	16,371	18,776	23,378	5,593	2,797	25,275
39	53, 64, 72, 84, 114	2,512	8,991	2,880	4,860	4,157	15,011
45	11, 32, 59, 69, 82	11,567	15,791	15,259	24,270	16,179	7,767
51	13, 33, 61, 70, 82v	20,773	29,500	15,024	5,835	20,526	7,385
52	16, 35, 62, 71, 83	6,537	31,618	9,199	18,221	4,807	3,976
56	3, 30, 43, 68a, 76	6,443	9,707	6,570	15,466	23,385	14,178
58	6, 31, 44, 68b, 81	5,761	14,427	22,380	22,961	9,748	12,269
59	11, 32, 45, 69, 82	3,435	16,462	14,863	30,638	15,174	14,438
68a	3, 30, 43, 76, 87	19,633	9,999	4,956	18,635	16,509	8,347
68b	6, 31, 44, 81, 89	8,359	14,158	19,683	21,365	13,504	3,387

^aEach row represents a single test mixture, with the list of types in each mixture in the first two columns, and the number of reads detected for each of those types in columns 3 to 8. Only read numbers for target types are shown for readability. HPV68a (lineages A and B) and HPV68b (lineages C to F) are uniquely identifiable by TypeSeq and were tested individually.