TABLE 1.
Primer | Sequence (5′ → 3′) | Usage |
---|---|---|
HA-ZAP-F | CCGGAATTCGCCACCATGGCGGACCCGGAGGTGTG | Amplification of ZAP and ZAP-L |
HA-ZAP-R | CGGGGTACCTCAAGCGTAATCTGGAACATCGTATGGGTACTCTGGCCCTCTCTTCATC | Amplification of ZAP and ZAP-M |
HA-ZAP-L-R | CGGGGTACCTCAAGCGTAATCTGGAACATCGTATGGGTAACTAATCACGCAGGCTTTG | Amplification of ZAP-L and ZAP-C |
HA-ZAP-N-R | CGGGGTACCTCACTTATCGTCGTCATCCTTGTAATCGTTTCTACGATGTGAAGA | Amplification of ZAP-N |
HA-ZAP-M-F | CCGGAATTCGCCACCATGGCGTATAGGGCTAGA | Amplification of ZAP-M |
HA-ZAP-C-F | CCGGAATTCGCCACCATGCGTCAGCCAGCACAGACCTCG | Amplification of ZAP-C |
Flag-Nsp9-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGTTTAAACTGCTAGCCG | Amplification of Nsp9 and 1–177/449 |
Flag-Nsp9-R | CCGCTCGAGTCACTCATGATTGGACCTG | Amplification of Nsp9 and 60/119/150/160/170–643 |
Flag-Nsp9 177-R | CCGCTCGAGTCAGCTTCCAGTGTCACTG | Amplification of Nsp9 1–177 |
Flag-Nsp9 449-R | CCGCTCGAGTCAGCCGCCTCTCTTAGTCAC | Amplification of Nsp9 1–449 |
Flag-Nsp9 178-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGCCGGTGCATGCAGCTG | Amplification of Nsp9 178–449/643 |
Flag-Nsp9 450-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGCTTTCGTCTGGCGACCCG | Amplification of Nsp9 450–643 |
Flag-Nsp9 60-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGGTTGCCCGACCGGTTGA | Amplification of Nsp9 60–643 |
Flag-Nsp9 119-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGGTTGCACTCAGTGCGCA | Amplification of Nsp9 119–643 |
Flag-Nsp9 150-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGGGCAACCCTGAGCGGGT | Amplification of Nsp9 150–643 |
Flag-Nsp9 160-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGCAGAATACAAGGTTTG | Amplification of Nsp9 160–643 |
Flag-Nsp9 170-F | CGGGGTACCGCCACCATGGATTACAAGGATGACGACGATAAGAAAACCCCCAGTGACAC | Amplification of Nsp9 170–643 |
Q-PRRSV-N-F | AAACCAGTCCAGAGGCAAGG | qRT-PCR for detection of PRRSV |
Q-PRRSV-N-R | TCAGTCGCAAGAGGGAAATG | |
Q-ZAP-F | CCACATCTTCTAGGGTGGATGA | qRT-PCR for detection of ZAP |
Q-ZAP-R | CGTCCAGGTTTCACCAATAAACA | |
Q-GAPDH-F | GAAGGTGAAGGTCGGAGTC | qRT-PCR for detection of GAPDHa |
Q-GAPDH-R | GAAGATGGTGATGGGATTTC |
GAPDH, glyceraldehyde-3-phosphate dehydrogenase.