Table 2.
Summary of the known and predicted genes identified
| Line | Cytology | Gene | Intron size | Insertion point* | Dup |
|---|---|---|---|---|---|
| Known genes | |||||
| G5 | 3R, 88E11-12 | tropomyosinII | 3.6 kb | AE003708, s, 94200 | 5 |
| G7 | 3R, 42B2 | Vha16, ductin, vacuolar H+ ATPase | 4 kb | AE003789, a, 140890 | |
| G29 | — | Eif-4a | — | — | |
| G33 | X, 3B2-3 | shaggy | 1.6 kb | AE003425, s, 13241 | |
| G44 | 2R, 49A6-9 | lachesin | 10.25 kb | AE003822, a, 71330 | |
| G53 | 3L, 62C2-3 | kettin | 6.3 kb | AE003473, a, 266941 | 1 |
| G74 | 2L, 27B1 | nervana2 Na-K ATPase | 1.4 kb | AE003615, a, 35458 | |
| G109 | 3R, 93A7-B1 | ATPalpha | 13.4 kb | AE003732, s, 208589 | 1 |
| G126 | 3L, 65D5 | sugarless | 2.4 kb | AE003560, s, 245000 | |
| G129 | 2L; 25C6-7 | Possibly Msp300 | AE003608, s, 167972 | 3 | |
| G138 | X, 3A10-B1 | shaggy (different from 33) | >3.2 kb | AE003424, s, 286224 | 2 |
| G158 | 2R; 51B1 | laminC | 2.4 kb | AE003814, s, 61032 | |
| G169 | 3R, 82D2 | karybeta3 | 800 bp | AE003605, a, 193456 | |
| G259 | 2L; 36A7 | VhaSFD vacuolar H+ ATPase | 144 bp | AE003652, a, app 111600 | |
| G262 | 2L; 25E6-F1 | lamin | 660 bp | AE003610, s, 104227 | |
| G280 | 3R, 97D2 | His2Av | 183 bp | AE003758, s, 79583 | |
| G305 | X; 7F1 | Neuroglian | 1.5 kb | AE003444, s, 133625 | |
| G409 | 2L; 33E1-6 | bunched | 75 kb | AE003636, a, 96208 | |
| G430 | 2R, 47A7-8 | Go-alpha 47A (5′isoform) | 8.6 kb | AE003829, a, 184947 | |
| G454 | 2L; 25C1 | Viking collagen type IV | 8 kb | AE003608, a, 84156 | |
| Predicted genes | |||||
| G9 | 2L; 25B10-C1 | CG8895 | 9.1 kb | AE003608, a, 59877 | 9 |
| G38 | 3R, 89B17-19 | CG6963, casein kinase | 14.5 kb | AE003712, s, 164508 | 1 |
| G88 | 3R; 86E13-14 | CG6783, fatty acid binding protein | 2.2 kb | AE003692, a, 43275 | 3 |
| G89 | 3L, 69C2-4 | CG10686, hom to yeast SCD6 and pleur Rap55 | 1 kb | AE003541, a, 60796 | 1 |
| G93 | X, 12B8 | CG10990, homology to mouse apoptosis protein MA3 | 3.4 kb | AE003493, a, 192168 | |
| G112 | 3L, 68C9-10 | CG6084, aldose reductase | <1.4 kb | AE003544, s, 112017 | |
| G119 | 2R; 53D13-14 | CG5935, homology to DEK oncogene | <600 bp | AE003805, a, 138771 | 3 |
| G147 | 3R; 86E15-17 | CG17238 | 15-26 kb | AE003692, a, 81655 | 2 |
| G180 | 2L; 23B1 | CG9894 | <2.4 kb | AE003582, a, 73988 | 1 |
| G189 | 2R, 52C7-8 | CG12969, LIM and PDZ domains | 20 kb | AE003809, s, 147222 | 1 |
| G196 | 2L, 39E3 | CG2207, l(2)k05815 | 1.5 kb | AE003781, a, 73505 | 1 |
| G198 | 3L, 71B2 | CG6988, Pdi, prot disulfide isomerase | 2.7 kb | AE003532, s, 76056 | |
| G245 | 3R; 92F13 | CG17273, BcDNA:LD32788 | <2.2 kb | AE003732, a, 80766 | |
| G264 | X; 12B9 | CG10997, Cl- channel homology | 7 kb | AE003493, a, 266426 | |
| G271 | 2R, 52F7 | CG8443 | 1.4 kb | AE003808, a, app 8580 | |
| G282 | X; 11E9-10 | CG1640, alanine aminotransferase | 3.4 kb | AE003492, s, 117333 | |
| G365 | X, 11B7-9 | CG2556 | 17 kb | AE003489, s, 19=186911 |
Dup, number of sequenced duplicates.
*
AE00xxxx is the GenBank accession number of the genomic scaffold the insertion matches to. s and a mean that GFP is in the sense or antisense orientation on the scaffold, respectively, and the number corresponds to the insertion point. app, approximately.